Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3634 ATGAGTCTCATTCATGGATATTTTATCCTATGGATTACAATGATTCTTTTCATCCATAATGTGGAAGGAAGATACCACCATCACAAGAAACCAAAAACTTCCCCTGCACCTAGTGACCCTTCACCACCTTCTTCCAATCCTCCTCCTACTACTCCTGGTGTTCCCTCTGATCCATATCCATATCCAAATGATCCTGGAGAATCTCCTTCCGATTGCGTTTTCGATGTAAGATCTTTCGGAGCAGTTGGAGATGGTGATGCTGATGACACAGCTGCATTTAGAGCAGCATGGAAAGCAGCTTGTTCAGTTGATTCAGGAGTTCTTTTAGCTCCGAAAAATTATTGTTTTAAAATCACTTCTACTATCTTTTCTGGTCCATGCAAACCAGGACTAGTTTTTCAAATTGATGGTACTTTGATGGCACCAGATGGACCAAATTGTTGGCCTGAGGCAGATAGTAAAAGTCAATGGCTTGTGTTTTATAGACTTGATCAAATGACTCTAAATGGATCAGGAATCATTGAAGGCAATGGAGAACAATGGTGGGATCTTCCTTGCAAACCTCATAGGAGTCCTAATGAGAAAACTGCATCAGGACCATGTGTTAGCCCTACAATGATAAGGTTCTTCATGAGCTCAAATTTGGTGTTAAGAGGGTTGAAAATACAAAATAGTCCTCAATTCCATGTGAAATTTGATGGTTGTCAAGGAGTATTAATTGATGAATTGTCCATTTCTGCACCTAAACTTAGTCCCAATACTGATGGAATACACTTAGGAAACACAAGGGATGTTGGGATTTATAATTCCATGATAAGCAATGGTGATGATTGCATTTCAATTGGTCCTGGTTGTTCAGATGTGAATGTGGATGGTGTAACTTGTGCTCCTACCCACGGAATTAGCATTGGAAGCCTTGGAGTACACAACTCTCATGCATGTGTCTCAAACTTAACAGTCAGAAATTCAATCATAAAAGAATCAGACAATGGACTAAGAATCAAAACATGGCAAGGTGGTACAGGATCAGTAACAGGTTTAACATTTGAAAATATCCAAATGGAGAATGTAAGAAACTGCATCAACATAGACCAATTCTACTGTTTATCAAAAGAGTGTATGAATCAAACTTCAGCTGTTTATGTGAACAATGTGTCATATAGAAAAATAAAGGGTACTTATGATGTGAGAACACCTCCTATACATTTTGCTTGTAGTGACACTGTTGCTTGCACAAACATAACACTTTCTGAGATTGAACTTTTGCCTTATGAAGGTGAGTTAGTTGATGACCCTTTTTGTTGGAATGCTTATGGAAGACAAGAGACTTTGACTATACCTCCACTTGATTGTTTGAGGGAAGGTGAACCTGAGACTATTGTGGAAACCTCTGAATATGAATGCAATAATTAA 1413 0.385 MSLIHGYFILWITMILFIHNVEGRYHHHKKPKTSPAPSDPSPPSSNPPPTTPGVPSDPYPYPNDPGESPSDCVFDVRSFGAVGDGDADDTAAFRAAWKAACSVDSGVLLAPKNYCFKITSTIFSGPCKPGLVFQIDGTLMAPDGPNCWPEADSKSQWLVFYRLDQMTLNGSGIIEGNGEQWWDLPCKPHRSPNEKTASGPCVSPTMIRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPKLSPNTDGIHLGNTRDVGIYNSMISNGDDCISIGPGCSDVNVDGVTCAPTHGISIGSLGVHNSHACVSNLTVRNSIIKESDNGLRIKTWQGGTGSVTGLTFENIQMENVRNCINIDQFYCLSKECMNQTSAVYVNNVSYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIELLPYEGELVDDPFCWNAYGRQETLTIPPLDCLREGEPETIVETSEYECNN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3634 470 Gene3D - 66 465 IPR012334 -
Mal4g3634 470 SMART pbh1 344 365 IPR006626 -
Mal4g3634 470 SMART pbh1 235 261 IPR006626 -
Mal4g3634 470 SMART pbh1 262 283 IPR006626 -
Mal4g3634 470 SMART pbh1 315 336 IPR006626 -
Mal4g3634 470 MobiDBLite consensus disorder prediction 28 62 - -
Mal4g3634 470 SUPERFAMILY Pectin lyase-like 71 468 IPR011050 -
Mal4g3634 470 PANTHER POLYGALACTURONASE PLANT-LIKE PROTEIN 5 459 - -
Mal4g3634 470 Pfam Glycosyl hydrolases family 28 108 421 IPR000743 GO:0004650|GO:0005975
Mal4g3634 470 MobiDBLite consensus disorder prediction 35 62 - -
Mal4g3634 470 PANTHER - 5 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3634 Mal-Chr4 107482934 107486526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3634 1 468 Glycoside Hydrolase AT1G48100 68.476 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3634 - - gmx:100785528 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3634 4 107482934 107486526 Mal4g3634 4 107482934 107486526 ECH
Mal4g3634 4 107482934 107486526 Mal1g1626 1 21243454 21245911 ECH