Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2358 ATGAGCTGGTCAGGAGGAGATTGGATGTGCAATGCTTGCCAGCACATAAACTTCAAGAAGAGGGATGCATGCCAAAATTGTGGATACCCTAAGATTGGAGGCCCTGATCCCGAAACTTATAGATATAACTGGACTGAAACCTTGGCAGGGGACTGGTATTGCAGTGGTATGAACTGTGGAGCTCACAACTATGCTAGCAGAACAAGCTGTTATAGATGTGGTGCATTGAAAAATGGTTACTCTTGTGGGAACATGGATGCCTCTGGAGGATATGGATCTGATTGCAATTACCCCCCTGGATGGAAAACTGGTGACTGGATTTGCACTAGATATGGCTGTGGAGTGCACAATTATGCTAGCAGAGCAGAATGCTTCAAGTGCAAAACACCCAAAAGTTATGGTGGTTCAGATTGA 414 0.4517 MSWSGGDWMCNACQHINFKKRDACQNCGYPKIGGPDPETYRYNWTETLAGDWYCSGMNCGAHNYASRTSCYRCGALKNGYSCGNMDASGGYGSDCNYPPGWKTGDWICTRYGCGVHNYASRAECFKCKTPKSYGGSD* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2358 137 ProSitePatterns Zinc finger RanBP2-type signature. 52 73 IPR001876 -
Mal4g2358 137 ProSitePatterns Zinc finger RanBP2-type signature. 106 127 IPR001876 -
Mal4g2358 137 SUPERFAMILY Ran binding protein zinc finger-like 98 133 IPR036443 -
Mal4g2358 137 SUPERFAMILY Ran binding protein zinc finger-like 48 79 IPR036443 -
Mal4g2358 137 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Mal4g2358 137 SMART zf_4 104 130 IPR001876 -
Mal4g2358 137 SMART zf_4 6 30 IPR001876 -
Mal4g2358 137 SMART zf_4 50 76 IPR001876 -
Mal4g2358 137 ProSiteProfiles Zinc finger RanBP2 type profile. 48 79 IPR001876 -
Mal4g2358 137 SUPERFAMILY Ran binding protein zinc finger-like 3 33 IPR036443 -
Mal4g2358 137 ProSiteProfiles Zinc finger RanBP2 type profile. 102 133 IPR001876 -
Mal4g2358 137 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Mal4g2358 137 PANTHER ZINC FINGER PROTEIN 1 134 - -
Mal4g2358 137 Gene3D - 44 79 - -
Mal4g2358 137 Gene3D - 1 35 - -
Mal4g2358 137 Gene3D - 94 134 - -
Mal4g2358 137 Pfam Zn-finger in Ran binding protein and others 102 131 IPR001876 -
Mal4g2358 137 Pfam Zn-finger in Ran binding protein and others 49 77 IPR001876 -
Mal4g2358 137 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2358 Mal-Chr4 59359921 59360764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2358 - - gmx:100792208 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4484 5 116895000 116896187 Mal4g2358 4 59359921 59360764 PCT