Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0597 ATGGGTGAAATCATTATGGTATCACCAACGGTGCAGTCACAATCTATGACTGTGAGCACCCCAAGGAAAAAAATGACAAAACAATTGACAGGAAAAAGAGATGATACACATTTGCATTCAGCAGCAAGAGCAGGGAATTTAGATGCTGTTAGGGATACCCTTAATGGTGCTGAAGAGGATGATTTGCTTGAATTATTGGCTAGGCAGAATCAAGATGGAGAAACAGTTCTTTATGTTGCAGCTGAGTATGGTTATATTGATGTTGTTAGGGAAATGATTCAATATTATGATCTTGCTGATGCTGGAATTAAAGCAAGAAATGGTTTTGATGCATTTCACATTGCTGCCAAACAAGGGGATATAGATATATTGAAGATCCTTATGGAAGTTCATCCTGAATTATCAATGACAGTAGATCCATCCAACACCACAGCTTTGCATACAGCTTCAACACAAGGACATATTGAGATAGTGAAATTACTATTGGAAGCAGGAAGTAGCTTAGCAACCATTGCTAAAAGTAACGGTAAAACGGCTCTTCATTCTGCTGCAAGAAATGGTCATTTGCAGGTTGTGAAAGCACTTGTTGAGAAAGAGCCTGGGGTTGCAACAAGGACTGATAAGAAAGGCCAGACAGCACTTCACATGGCAGTAAAGGGACAAAATCTTGAGGTAGTGGAAGAGTTGATAAAAGCAGATCCTTCAACAATAAACATGGTTGATACTAAAGGAAACACAACATTGCATATAGCAACCAGGAAAGCTAGAGCTCAGATCGTAAAGATGCTTCTAGGACAAAAGGAAACAAATTTAAGTGCCGTTAACAGATCAGGTGAAACAGCAGTAGACACTGCTGAGAAAGTAGGGAACCAGGAAGTTAAAGCCATCCTATTAGAACATGGTGTTCAAAGTGCAAGAGCCATAAAACCACAAGGATCAACAACCACAGCTCGCGAGTTAAAACAAACTGTAAGCGACATAAAGCACGAGGTACATTACCAATTAGAACACACACGCCAAACGCGAAAACGTGTTCAAGGTATCGCCAAACGAATCAACAAGATGAATACAGAAGGACTCAACAATGCAATAAACTCAACAACTGTTGTTGCAGTACTAATAGCAACCGTTGCATTCGCTGCAATTTTCACTGTCCCTGGTCAATTTGTCGATGATCCAAACAATATTCCAGAAGGGATGATACTTGGTGAAGCAAATATAGCTCCAGAATTACCATTTATAATTTTCTTTGTGTTTGATTCTATTGCACTCTTCATTTCTCTGGCTGTTGTGGTTGTTCAAACTTCGGTTGTTGTTATAGAAAGCAAAGCAAAGAAACAAATGGCGGCTATAATTAATAAGCTAATGTGGTTGGCTTGTGTGCTTGTTTCTGTGGCATTTTTGGCATTGTCATTTGTTGTGGTTGGAAAGGAAGAAAGGTGGCTGGCAATTGGTGTTACCATTATAGGGACAACTATTATGGCTACAACTTTAGGAACTATGTGTTATTGGGTTATTAAGCATCGAATTGAGGCATCAAACTTGAGGAACATAAGGAAATCTTCAATGGAAAGCAAATCAAAGTCTTTTTCAATGACAGCTTATTCAGATTCTGAGCTGATGAACAATGACTTTAAGAAAATGTATGCTATTTAG 1656 0.3883 MGEIIMVSPTVQSQSMTVSTPRKKMTKQLTGKRDDTHLHSAARAGNLDAVRDTLNGAEEDDLLELLARQNQDGETVLYVAAEYGYIDVVREMIQYYDLADAGIKARNGFDAFHIAAKQGDIDILKILMEVHPELSMTVDPSNTTALHTASTQGHIEIVKLLLEAGSSLATIAKSNGKTALHSAARNGHLQVVKALVEKEPGVATRTDKKGQTALHMAVKGQNLEVVEELIKADPSTINMVDTKGNTTLHIATRKARAQIVKMLLGQKETNLSAVNRSGETAVDTAEKVGNQEVKAILLEHGVQSARAIKPQGSTTTARELKQTVSDIKHEVHYQLEHTRQTRKRVQGIAKRINKMNTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPNNIPEGMILGEANIAPELPFIIFFVFDSIALFISLAVVVVQTSVVVIESKAKKQMAAIINKLMWLACVLVSVAFLALSFVVVGKEERWLAIGVTIIGTTIMATTLGTMCYWVIKHRIEASNLRNIRKSSMESKSKSFSMTAYSDSELMNNDFKKMYAI* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0597 551 ProSiteProfiles Ankyrin repeat region circular profile. 175 198 - -
Mal4g0597 551 SUPERFAMILY Ankyrin repeat 38 302 IPR036770 -
Mal4g0597 551 ProSiteProfiles Ankyrin repeat region circular profile. 107 129 - -
Mal4g0597 551 ProSiteProfiles Ankyrin repeat region circular profile. 209 231 - -
Mal4g0597 551 Pfam Ankyrin repeats (3 copies) 26 95 IPR002110 GO:0005515
Mal4g0597 551 Pfam Ankyrin repeats (3 copies) 102 168 IPR002110 GO:0005515
Mal4g0597 551 Pfam Ankyrin repeats (3 copies) 173 234 IPR002110 GO:0005515
Mal4g0597 551 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
Mal4g0597 551 ProSiteProfiles Ankyrin repeat profile. 209 231 IPR002110 GO:0005515
Mal4g0597 551 ProSiteProfiles Ankyrin repeat profile. 175 207 IPR002110 GO:0005515
Mal4g0597 551 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 13 551 - -
Mal4g0597 551 SMART ANK_2a 141 170 IPR002110 GO:0005515
Mal4g0597 551 SMART ANK_2a 107 136 IPR002110 GO:0005515
Mal4g0597 551 SMART ANK_2a 243 273 IPR002110 GO:0005515
Mal4g0597 551 SMART ANK_2a 72 101 IPR002110 GO:0005515
Mal4g0597 551 SMART ANK_2a 33 62 IPR002110 GO:0005515
Mal4g0597 551 SMART ANK_2a 175 204 IPR002110 GO:0005515
Mal4g0597 551 SMART ANK_2a 209 239 IPR002110 GO:0005515
Mal4g0597 551 Gene3D - 132 303 IPR036770 -
Mal4g0597 551 ProSiteProfiles Ankyrin repeat profile. 243 264 IPR002110 GO:0005515
Mal4g0597 551 PANTHER ANKYRIN REPEAT PLANT PROTEIN 13 551 - -
Mal4g0597 551 ProSiteProfiles Ankyrin repeat region circular profile. 141 168 - -
Mal4g0597 551 Pfam Domain of unknown function 358 474 IPR026961 -
Mal4g0597 551 ProSiteProfiles Ankyrin repeat profile. 107 139 IPR002110 GO:0005515
Mal4g0597 551 ProSiteProfiles Ankyrin repeat region circular profile. 243 264 - -
Mal4g0597 551 Pfam Ankyrin repeat 244 275 IPR002110 GO:0005515
Mal4g0597 551 Gene3D - 16 131 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0597 Mal-Chr4 6028012 6030786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0597 19 551 Miscellaneous Gene Families AT1G07710 73.734 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0597 - - gmx:100779230 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0597 4 6028012 6030786 Mal4g0597 4 6028012 6030786 ECH
Mal4g0597 4 6028012 6030786 Mal7g2189 7 77960106 77963142 ECH
Mal3g4131 3 120086767 120089716 Mal4g0597 4 6028012 6030786 ECH