Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4131 ATGAAGAAACAATTGACAGGTTTAAGGGGTGATTCTCACTTGCACTCGGCAATTCGAGTTGGAAATTTGGAGTTGGTGTTGGAAATCATCTCTGAGAATCAAGGTGATGGACTAAAGGAGTTGTTTTCAAAGCAAAATAACTCTAGTGAAACTGCTTTATATATTGCTGCTGAAAATGGTCATCTTGATATTGTGAAGGAATTGATCAAATACCATGATATTGGGTTGGCTAGCTTGAAAGCTAGAAATGGATTTGATGCATTTCATGTTGCTGCTAAAAATGGAAACTTAGAGATATTGAAGGTCCTCACAGAGGCATTTCCTGAAATTTCAATGACAGTTGATCTGACAAACACTACTGCACTGCACACTGCTGTGTCACAAGGGCATATTGAAATAGTAAATTTTCTCTTAGAGAAAAGTAGCAGCGTCGTAACTATTGCAAAAAGTAACGGGAAAACGGCATTTCATTCTGCTGCAAGAAATGGCCACGTGGAGGTCATCAAGGCCCTGCTAAGCAGTGAACCTGAAATTGCAATGAGAGTTGATAAGAAGGGGCAAACCGCACTCCATATGGCAGTTAAAGGGCAAAATCTGGAGGTAGTGGACGAGCTTTTGAAACTGAACCCATCTTTTGCTAATATGGTGGATGCCAAGGGAAACACTGCACTTCATATAACAACCCGGAAGGGTCGTCTACAGATTGTTCAGAAGCTACTAGAGTGCAAAGAAATAGACACTGATGTTATTAATAAATCTGGAGAAACAGCTTTGGATATTGCAGAGAGAAATGGTCGCTTGGACATCGCCAAATTTTTGCAGGATCGTGGAGCTCAAAATGCCAGGTCTGTCAAGTCACCTTCTACAAACAGAGCCCTTGAACTCAAACGAACCGTGAGTGACATAAAAAGTGGGGTTCATAACCAGCTGGAACACACATTTAAAACTCAGAGACGTATGAAAGGCATAGCAAAGCGAATTAACAAGATGCAGGCTGAGGGGCTTAACAATGCAATCAACTCCAACACTGTAGTTGCTGTCCTCATTGCAACAGTTGCTTTTGCTGCCATATTTACTGTCCCAGGCCAGTATCCTCAGAACACACAGCAACTCGCTCCTGCAATGTCTCCTGGGGAAGCCAATATTGCTCCCAATATTGAATTTTTGATATTCGTAATATTTGATTCTACTGCCCTTTTCATATCATTGGCTGTTGTGATTGTCCAAACGTCAGTGGTCGTTATTGAGAGGGAAGCAAAGAAACAAATGACGGCGGTTATAAATAAGTTGATGTGGATAGCATGTGTGTTAATTTCTGTGGCATTCCTTGCAATGTCATACATAGTTGTTGGGGATCAAAAAGAGTTGGCTATTGCAGCCACAGCTCTAGGAACAGTGATTATGGCAGCTACTCTAGGAACACTCTGTTATTGGGTGATTGCTCACCGCCTCGAGGCCTCCAGATTACGAAGTCTCAGAACAATGACGAGCAGTAGGCACTCATTGACTATGTCAGGGATGTCAGCTTCTGAGAATGAGTATAAAACAGTGTACGCAATATAA 1563 0.4184 MKKQLTGLRGDSHLHSAIRVGNLELVLEIISENQGDGLKELFSKQNNSSETALYIAAENGHLDIVKELIKYHDIGLASLKARNGFDAFHVAAKNGNLEILKVLTEAFPEISMTVDLTNTTALHTAVSQGHIEIVNFLLEKSSSVVTIAKSNGKTAFHSAARNGHVEVIKALLSSEPEIAMRVDKKGQTALHMAVKGQNLEVVDELLKLNPSFANMVDAKGNTALHITTRKGRLQIVQKLLECKEIDTDVINKSGETALDIAERNGRLDIAKFLQDRGAQNARSVKSPSTNRALELKRTVSDIKSGVHNQLEHTFKTQRRMKGIAKRINKMQAEGLNNAINSNTVVAVLIATVAFAAIFTVPGQYPQNTQQLAPAMSPGEANIAPNIEFLIFVIFDSTALFISLAVVIVQTSVVVIEREAKKQMTAVINKLMWIACVLISVAFLAMSYIVVGDQKELAIAATALGTVIMAATLGTLCYWVIAHRLEASRLRSLRTMTSSRHSLTMSGMSASENEYKTVYAI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4131 520 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Mal3g4131 520 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Mal3g4131 520 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Mal3g4131 520 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 520 - -
Mal3g4131 520 Pfam Domain of unknown function 333 449 IPR026961 -
Mal3g4131 520 ProSiteProfiles Ankyrin repeat region circular profile. 219 241 - -
Mal3g4131 520 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
Mal3g4131 520 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Mal3g4131 520 ProSiteProfiles Ankyrin repeat profile. 253 279 IPR002110 GO:0005515
Mal3g4131 520 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Mal3g4131 520 SMART ANK_2a 219 249 IPR002110 GO:0005515
Mal3g4131 520 SMART ANK_2a 151 180 IPR002110 GO:0005515
Mal3g4131 520 SMART ANK_2a 253 283 IPR002110 GO:0005515
Mal3g4131 520 SMART ANK_2a 48 76 IPR002110 GO:0005515
Mal3g4131 520 SMART ANK_2a 9 40 IPR002110 GO:0005515
Mal3g4131 520 SMART ANK_2a 83 112 IPR002110 GO:0005515
Mal3g4131 520 SMART ANK_2a 185 214 IPR002110 GO:0005515
Mal3g4131 520 SMART ANK_2a 117 147 IPR002110 GO:0005515
Mal3g4131 520 ProSiteProfiles Ankyrin repeat region circular profile. 48 70 - -
Mal3g4131 520 ProSiteProfiles Ankyrin repeat profile. 48 70 IPR002110 GO:0005515
Mal3g4131 520 Gene3D - 145 211 IPR036770 -
Mal3g4131 520 Gene3D - 1 144 IPR036770 -
Mal3g4131 520 Gene3D - 212 297 IPR036770 -
Mal3g4131 520 Pfam Ankyrin repeats (3 copies) 10 74 IPR002110 GO:0005515
Mal3g4131 520 Pfam Ankyrin repeats (3 copies) 80 143 IPR002110 GO:0005515
Mal3g4131 520 Pfam Ankyrin repeats (3 copies) 151 207 IPR002110 GO:0005515
Mal3g4131 520 Pfam Ankyrin repeats (3 copies) 217 279 IPR002110 GO:0005515
Mal3g4131 520 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Mal3g4131 520 ProSiteProfiles Ankyrin repeat region circular profile. 253 279 - -
Mal3g4131 520 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 520 - -
Mal3g4131 520 ProSiteProfiles Ankyrin repeat profile. 219 241 IPR002110 GO:0005515
Mal3g4131 520 ProSiteProfiles Ankyrin repeat region circular profile. 151 173 - -
Mal3g4131 520 SUPERFAMILY Ankyrin repeat 14 278 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4131 Mal-Chr3 120086767 120089716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4131 1 520 Miscellaneous Gene Families AT1G07710 62.357 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4131 - - gmx:100787392 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4131 3 120086767 120089716 Mal3g4131 3 120086767 120089716 ECH
Mal3g4131 3 120086767 120089716 Mal4g0597 4 6028012 6030786 ECH
Mal3g4131 3 120086767 120089716 Mal7g2189 7 77960106 77963142 ECH