Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0369 ATGAACGGTGGTGATGATGTTGTTGCAGCAGCTCCGGCGGGTCCACCGGTTCCGTTGGAGTGGAAATTCTCTCAGGTGTTCGGTGAACGTACGGCTGGTGAAGAGGTTCAGGAAGTGGACATAATTTCTGCTATCGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTGGTACTCTTTGAGAGGACAGATACAAAAGATCATGGTGAATCTAGAAGGGATTCAGAGAGGATGGACTATTCTATCAGCAGGCATCCTGAATTTCGTTACAAAACAGAGTTTCAGAGTCACGAGCCTGAGTTTGACTACCTTAAGAGTTTGGAGATAGAAGAGAAAATCAACAAAATCAGATGGTGCCAAATAGCTAATGGTGCCCTTTTCCTTCTCTCGACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAGTTGCTGAGATGAATGTTGACCCTTCAAAAACAATGGGAAATGGCTGTATTGCTAGTTCAAGTAATTCAAGTAATCCTCGGCCAAGCCTTGAAAATGGAGGATATCCAGATTCAGATAGATCATTCAATTATCTTAGCCCTGACTTCTCATTTCCACCGGGAGGCATACCATCACTAAGATTACCCGTGGTAAGTAGCCATGAAACCAGCTTGGTGGCTCGATGCCGTAGAGTTTATGCCCATGCACACGATTATCATATCAATTCAATTTCAAATAACAGCGATGGCGAAACTTTCATATCAGCCGATGATTTGCGAATAAATCTTTGGAACCTGGAAATAAGCAGTCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAACATGGAGGATCTGACAGAGGTTATAACATCAGCAGAGTTCCACCCTACACACTGTAATACATTGGCATATAGCAGTTCGAAGGGTTCAATCCGTCTAATTGATTTGCGGCAATCAGCATTATGTGATTCTCATGCCAAACTATTTGAGGAACAAGAGGCCCCAGGATCGAGGTCATTTTTCACAGAGATTATTGCTTCTATATCTGACATCAAATTTGGGAAAGATGGAAGATACATACTGAGCCGCGATTACATGACTTTAAAGTTGTGGGACATTAATATGGATTCAGGTCCCGTTGCAACTTATCAGGTTCATGAGTATCTAAGACCTAAGCTTTGTGATTTATATGAAAACGATTCAATATTTGATAAGTTCGAGTGTTGTCTGAGTGGTGACGGATTGCGGGTAGCAACTGGTTCCTACAGCAATTTATTCCGAGTATTTGGCTGTGCTCCTGGAAGTACTGAAGCTACAACTTTGGAAGCCAGTAAAAACCCAATGAGACGACAAGTTCCGACCCCCTCAAGGCCGTCTAGATCACTGGGAAATAGTATAACCCGAGTTGTAAGAAGGGGAGCAGAAAACCCCGGGGTTGATGCAAACGGAAACTCGTTTGATTTCACAACAAAGTTGTTGCACTTAGCATGGCATCCATCTGAAAATTCAATTGCCTGTGCTGCTGCAAATAGCTTGTACATGTACTATGCATAA 1557 0.4226 MNGGDDVVAAAPAGPPVPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGESRRDSERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQIANGALFLLSTNDKTIKFWKVQEKKVKKVAEMNVDPSKTMGNGCIASSSNSSNPRPSLENGGYPDSDRSFNYLSPDFSFPPGGIPSLRLPVVSSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATYQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAENPGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0369 518 SUPERFAMILY WD40 repeat-like 40 510 IPR036322 GO:0005515
Mal4g0369 518 PIRSF PPA2_B55 15 518 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 SMART WD40_4 276 316 IPR001680 GO:0005515
Mal4g0369 518 SMART WD40_4 106 146 IPR001680 GO:0005515
Mal4g0369 518 SMART WD40_4 226 265 IPR001680 GO:0005515
Mal4g0369 518 SMART WD40_4 32 67 IPR001680 GO:0005515
Mal4g0369 518 SMART WD40_4 335 373 IPR001680 GO:0005515
Mal4g0369 518 Gene3D - 37 182 IPR015943 GO:0005515
Mal4g0369 518 Gene3D - 223 324 IPR015943 GO:0005515
Mal4g0369 518 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 1 518 - -
Mal4g0369 518 MobiDBLite consensus disorder prediction 165 187 - -
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 122 150 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 237 264 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 404 430 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 93 121 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 378 403 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 265 292 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 350 377 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 293 321 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 322 349 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 487 516 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 46 66 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 Gene3D - 325 514 IPR015943 GO:0005515
Mal4g0369 518 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 1 518 IPR000009 GO:0000159|GO:0019888
Mal4g0369 518 Pfam WD domain, G-beta repeat 229 265 IPR001680 GO:0005515
Mal4g0369 518 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 235 249 IPR018067 -
Mal4g0369 518 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 106 120 IPR018067 -
Mal4g0369 518 MobiDBLite consensus disorder prediction 445 464 - -
Mal4g0369 518 MobiDBLite consensus disorder prediction 166 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0369 Mal-Chr4 2776329 2784543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0369 K04354 - gmx:100799449 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0547 5 8473761 8481493 Mal4g0369 4 2776329 2784543 ECH
Mal4g0369 4 2776329 2784543 Mal4g0369 4 2776329 2784543 ECH
Mal4g0369 4 2776329 2784543 Mal5g0547 5 8473761 8481493 PCT