Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4795 ATGAAGCTCATCGCAGTGTTAATGCTTGTGGTGTTAACCACCACCGTCACTTCAGATCCTGATAATCTTCAAGACCTCTGTGTCGCAGACCTTGCTTCTGCGATTCTAGTGAATGGATTCACATGCAAACCAGCTTCAAATGTAACCGCAGCTGATTTCTCCTCAAACATACTAGCCAAACCAGGTTCCACAAACAACACATTTGGTTCCTTAGTAACCGCAGCTAATGTTCAGAAAATCCCAGGACTCAACACACTTGGTGTGTCAATGGCACGTATTGACTATGCTGTTGGTGGACAGAACCCACCTCATACTCACCCACGTGCAACTGAGATTGTGTTTGTTCTTGAAGGTCAATTAGATGTTGGGTTTATAACAACAGCTAATGTTTTCATATCAAAGACTATTGTTAAGGGTGAAACATTTGTGTTTCCTAAAGGTTTGGTTCATTTTCAAAAGAACAGTGGTTGGGTACCTGCTTCAGTTATTGCTGCATTTAATAGTCAATTGCAAGGGACTGTCAATATTCCTCTTACTTTGTTTGCTTCTACACCACCTGTTCCAGATAATGTGTTGACTCAAGCATTCCAAATTGGTACCAAAGAAGTTCAGAAAATCAAGTCTAGGCTTGCACCCAAGTAG 642 0.4143 MKLIAVLMLVVLTTTVTSDPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSSNILAKPGSTNNTFGSLVTAANVQKIPGLNTLGVSMARIDYAVGGQNPPHTHPRATEIVFVLEGQLDVGFITTANVFISKTIVKGETFVFPKGLVHFQKNSGWVPASVIAAFNSQLQGTVNIPLTLFASTPPVPDNVLTQAFQIGTKEVQKIKSRLAPK* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4795 213 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 4 5 211 - -
Mal3g4795 213 Pfam Cupin 58 204 IPR006045 -
Mal3g4795 213 PRINTS Germin signature 104 124 IPR001929 GO:0030145
Mal3g4795 213 PRINTS Germin signature 134 154 IPR001929 GO:0030145
Mal3g4795 213 PRINTS Germin signature 167 182 IPR001929 GO:0030145
Mal3g4795 213 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 5 211 - -
Mal3g4795 213 Gene3D Jelly Rolls 18 212 IPR014710 -
Mal3g4795 213 SMART Cupin_1_3 55 204 IPR006045 -
Mal3g4795 213 CDD cupin_OxOx 19 210 - -
Mal3g4795 213 ProSitePatterns Germin family signature. 99 112 IPR019780 GO:0030145
Mal3g4795 213 SUPERFAMILY RmlC-like cupins 19 209 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4795 Mal-Chr3 127932445 127933784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4795 4 213 Miscellaneous Gene Families AT3G05930 52.133 3.52e-74 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4795 - - gmx:100791628 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4795 3 127932445 127933784 Mal3g4795 3 127932445 127933784 ECH
Mal3g4795 3 127932445 127933784 Mal1g1567 1 20471728 20473298 PCT