Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4681 ATGGCGGTCACAACTCACTCTTTAACCGCTACAGAAAAGAAACATTGGTGGCTCACAAACCGAAAGATTGTGGAGAAATACATAAAAGACGCACGAAACTTAATAGCAACACAAGAACAGAGCGAGATCCTTTCAGCTTTGAATCTTCTAGACGCAGCTTTAGCTATATCACCACGTTTGGATCAAGCTCTTGAGCTAAGAGCTAGGTCATTGCTTTACCTAAGAAGATTCAAAGATGTAGCTGATATGCTTCAAGACTACATTCCTAGTTTGAGAATGGCGAATGAAGATCCTTCTGCAGGTTCTTCTTCTGATAGTTCTTCTAGAGAAGGAGTGAAGCTTCTCTCATCTGATTCACCGATTAGAGATCAGAGTTTTAAGTGCTTCTCTGTTTCTGACCTCAAGAAGAAGGTTATGGCTGGTCTTTGTAAAAGTTGTGATAAAGAAGGGCAATGGAGATACTTGGTTTTGGGTGAAGCATGCTGCCATTTAGGACTAATGGAGGATGCAATGGTTCTTCTCCAAACCGGAAAACGGATTGCAAGTGCAGCATTCCGGAGAGAGAGTGTCTGCTGGTCCGATGACAGTTTTCCTCTATTATCTATCCCATTGGCCGGAGACACTCCAAACCAACAACCCACCACACCGCCACGAGCCCCTCTCAACGAAACAGAAAGTGTAACACACCTCCTCAGCCACATCAAATTCCTCCTCCGCCGTCGTGCAGCAGCGCTCGCTGCCCTCGATGCTGGTCTCTACTCAGAAGCCATTCGCCATTTCTCAAAAATTGTTGATGGCCGCCGCGCCGCCCCACAAGGCTTCCTAGCAGAATGCTACATGCACAGAGCCTCTGCACACCGTTCTGCTGGTCGAATTGCAGAGTCCATCGCCGATTGTAACCGCACTCTTTCACTAGACCCAACCTGCATTCAAGCACTAGAAACCAGAGCTTCACTCTTCGAAGCAATTCGCTGTTTACCCGATTCACTACACGATTTAGAACATTTGAAACTTCTCTACAACTCCATCTTACGTGATCGGAAACTTCCAGGTCCTGCTTGGAAACGCCACAATGTCCGATACAGAGAGATTCCAGGGAAACTGTGTGCCTTAACCACTAAGATTCAAGAATTGAAACAAAGGTTATCTTCTGGTGAAACCACTAGTGTTGATTACTATGCATTGATTGGAGTTCGACGTGGGTGTTCCCGTTCTGAATTGGAGAGAGCTCATTTGTTGCTTTGTCTTCGTCATAAGCCAGATAAAGCTACAAATTTCATCGAAAGGTGTGAGTTTGCGGATGAACGTGATATTGATACGGTAAAGGAGAAAGCAAAGATGTGTTCATTGTTGTTGTATAGATTGGTTCAAAAGGGATACACAAGTGTGATGAGTAATGTATTAGATGAGGAAGCTGCTGAGAAACAAAGGAAGAAGAATGCTGTTGCTGCAGCACAAGCACAGGTAGTGGCAAATCAAGTCATCAAGAAAACAAGTGAAGCTGAGCTGAAAAATCACAAGGCTGAAAATAAGAGTAGTAATGTTTTTGTGGAAAATGATCAGTCTCAGATATCTTCTTGTACGGTGAATCCGGCGGTGTTTCAAGGTGTGTTTTGCCGCGATCTTGCGGTGGTAGGAAATTTGTTGACGCAGGCACGATTTAATCGACCAATGCCGGTGAAGTATGAAGCATTGAGCTGCTAA 1704 0.446 MAVTTHSLTATEKKHWWLTNRKIVEKYIKDARNLIATQEQSEILSALNLLDAALAISPRLDQALELRARSLLYLRRFKDVADMLQDYIPSLRMANEDPSAGSSSDSSSREGVKLLSSDSPIRDQSFKCFSVSDLKKKVMAGLCKSCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSDDSFPLLSIPLAGDTPNQQPTTPPRAPLNETESVTHLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLSLDPTCIQALETRASLFEAIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRLSSGETTSVDYYALIGVRRGCSRSELERAHLLLCLRHKPDKATNFIERCEFADERDIDTVKEKAKMCSLLLYRLVQKGYTSVMSNVLDEEAAEKQRKKNAVAAAQAQVVANQVIKKTSEAELKNHKAENKSSNVFVENDQSQISSCTVNPAVFQGVFCRDLAVVGNLLTQARFNRPMPVKYEALSC* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4681 567 SUPERFAMILY TPR-like 242 337 IPR011990 GO:0005515
Mal3g4681 567 PANTHER - 1 567 - -
Mal3g4681 567 SMART tpr_5 276 309 IPR019734 GO:0005515
Mal3g4681 567 Gene3D Tetratricopeptide repeat domain 212 349 IPR011990 GO:0005515
Mal3g4681 567 Coils Coil 468 488 - -
Mal3g4681 567 SUPERFAMILY Chaperone J-domain 388 425 IPR036869 -
Mal3g4681 567 MobiDBLite consensus disorder prediction 96 116 - -
Mal3g4681 567 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 567 - -
Mal3g4681 567 MobiDBLite consensus disorder prediction 95 116 - -
Mal3g4681 567 CDD DnaJ 391 425 IPR001623 -
Mal3g4681 567 Gene3D DnaJ domain 376 523 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4681 Mal-Chr3 126639059 126641945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4681 - - gmx:100808420 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4681 3 126639059 126641945 Mal1g1676 1 21877560 21879658 PCT