Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1676 ATGCTCAAGGACTGCGTTCGTAATTTGAAAATGGCAAATGATTCAGCCTCGGATTCCTTTGTTTTAGATCAGAGTTTGTTCGAGCGCTTCTCTAATTTGATAAAACATGCCATGACTGGTCTCCTTAAAAGTGGCGGGAACCAAGGATATTGGAGATACTTGGTGTTGGGGAAAACATGTTTCCATTTAGGCCTATTGGATGATGCAACTATTCTTCTCCAAACTGGAAAAAACCTCGCCAGAGCTGCATTCCGCCGCAAGAGCGCGTCATGGTCTGACGACCTCTTCTCTGAATCTAACACACTGTTCTCCGACGATGCCATTTCAAGGCCACCAACAACCACAACATCCCTAAACCCTCAAGCTCAATTCGAAACCGCAAACCAACTCCTGGCAAAGATAAAATTCTGCCTCTGTCGACGTACCACTGCAATCGCCGCCTTGGACGCTGGACTTTACTCGGAAGCCATCCGACACTTCTCAAAAATTGTCGACGGCTGCAGAGCTCCTCAAGCATTCCTTGCTGAATGCTACCTGCTCAGAGCCTTAGCATTTCGCTCAGCTGGTCGAATCGCTGATTCAGTCGCTGATTATAACAGAACACTATCATTAGACCCCAATTGTTTCCGTGCTCTTGAAGCCAGAGCCTCTATTTTAGAAACCATTCACTGCTACCAAGATTGTCGCCGTGATCTTGAACACATGAAGCGTCTCTACTACGCAATTTTGAGCAATCGCAAACTCTCTTATCCTGTATGGAAACCGCACAACGTTCGCTATAATGAGATTCCTGAGAAGGTTCGCGCCATAACCGCGAAAATTGAACTGCTGAAACAAAATATGGCTAATGCTGAAATGTCTAATGTGGATTACTATGCTTTGATCGGGTTGCCACGTGGGTGTGATCGATCGGAATTGGAGAGGACATACCGTTTGCTTTCTTGGAGGCATAAACCCGAGACAGCCACATGTTTCATCGAACGGTGTGAACTTGCGGATGAACGCGATGTTAACGCAGTTAAGGATAGAGCGATGATGTCTGCTAATTTGTTGTATAAATTGCTTGAGAAAGGGTATTCAAGTGTTATGAATACAATTATGGAAGAAGAAACTGATGAGAAACGGAAGAAGATGGTTTTGCAGTTACATCAAACTTCTGCAAATGCTTATGCTGATGCAAATGCGAATGTACATTCAGTTGTTGAACTGCAAGAAACAACTGAGAATGCATGCAAGTAG 1239 0.4447 MLKDCVRNLKMANDSASDSFVLDQSLFERFSNLIKHAMTGLLKSGGNQGYWRYLVLGKTCFHLGLLDDATILLQTGKNLARAAFRRKSASWSDDLFSESNTLFSDDAISRPPTTTTSLNPQAQFETANQLLAKIKFCLCRRTTAIAALDAGLYSEAIRHFSKIVDGCRAPQAFLAECYLLRALAFRSAGRIADSVADYNRTLSLDPNCFRALEARASILETIHCYQDCRRDLEHMKRLYYAILSNRKLSYPVWKPHNVRYNEIPEKVRAITAKIELLKQNMANAEMSNVDYYALIGLPRGCDRSELERTYRLLSWRHKPETATCFIERCELADERDVNAVKDRAMMSANLLYKLLEKGYSSVMNTIMEEETDEKRKKMVLQLHQTSANAYADANANVHSVVELQETTENACK* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1676 412 PANTHER - 27 398 - -
Mal1g1676 412 Gene3D Tetratricopeptide repeat domain 105 249 IPR011990 GO:0005515
Mal1g1676 412 ProSiteProfiles TPR repeat profile. 175 208 IPR019734 GO:0005515
Mal1g1676 412 SUPERFAMILY TPR-like 141 239 IPR011990 GO:0005515
Mal1g1676 412 SMART tpr_5 175 208 IPR019734 GO:0005515
Mal1g1676 412 CDD DnaJ 290 319 IPR001623 -
Mal1g1676 412 Coils Coil 267 287 - -
Mal1g1676 412 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 27 398 - -
Mal1g1676 412 SUPERFAMILY Chaperone J-domain 283 323 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1676 Mal-Chr1 21877560 21879658 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1676 - - mtr:MTR_3g102140 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1676 1 21877560 21879658 Mal1g1676 1 21877560 21879658 ECH
Mal3g4681 3 126639059 126641945 Mal1g1676 1 21877560 21879658 PCT