Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4580 ATGTCGAAAATGATGTACTCGTTCCCTGAAGAAGTTCTAGAATACGTATTCTCCTTCATTCAAAACGACAAAGACCGAAACGCAATCTCTCTGGTATGCAAATCATGGTACGAGATCGAACGGTGGTGCAGGAAGAAGATTTTCATCGGAAACTGTTACGCCGTGAATCCAACGACGGTGATCAAACGGTTCCCGGAGCTGAGATCCATTGCGTTGAAAGGGAAACCACACTTTGCGGATTTCAATTTGGTACCTGAAGGTTGGGGTGGTTACGTTTTTCCTTGGATCGAAGCTATGGCTGAAGGTTTTCCTTTGCTCGAAGAGATTCGTCTGAAGAGGATGGTTGTAACTGATGAGAGTTTGGAACTTATTGCTAAATCCTTTAAGAATTTCAAAGTTTTGGTTCTTATTTCGTGTGAGGGTTTCACTACTGATGGACTTGCCGCTATTGCTTCCAATTGCAGGAATTTGAAGGAGTTGAACTTGCAGGAGAGTGAAGTGGAGGACCTTAGTGGGCATTGGCTATGCCATTTCCCTGATTCCTACACATCATTAGTTTCACTTAACATCTCTTGCTTGCACAATGAGGTGACTTTGTCTGCACTAGAGCGCCTGCTTGGCAGGTGTCCTAACCTCCAGACTCTTCGACTCAATCATGCTGTGCCCCTTGATAAACTGCCCAACATACTTAGCCGATGTCCTCAGCTGGTTGAGTTAGGCACAGGAGTCTACTCAACTGAGATGCGACCAGAGGTCTTCTCAAACCTAGTAACTGCATTTTCTGGGTGCAAGCATTTGAAGAGCTTGTCTGGCTTTTGGCATGTTCTCCCATCCTACCTTCCGACAGTATACCCAATCTGCTCTAGGCTTACATCACTAAACCTGAGTTATGCTATCATTCAAAGCTGTGATCTTGTCAAACTTGTAGGCCAATGCCCCAATTTGTTGCGGTTATGGGTGCTTGATTACATAGAAGATGTTGGTCTGGATGCTGTTGCTGCTTCATGCAAGGATCTACAGGAGTTGAGGGTGTTTCCGTCTGACCCATTTGGTTTAGAACCAAATATTGCTTTGACAGAACGTGGCCTCGTCTCTGTATCTGAAGGCTGCCCAAAGCTCCAGTCAGTTTTATATTTTTGTCGTCAAATGTCTAATGCTGCTCTAAATACTATTGCGCAGAATAGGCCTAATTTGACTCGTTTTCGCCTCTGTATTCTTGAGCCTCGAACTCCTGACCATCTTACCCTTCAACCACTGGATTCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCAGCGCCTTTCCATGTCTGGTCTTTTAACTGATCGTGTTTTTGAGTATATTGGAACTCATGCTAAGAAGCTGGAGATGTTGTCTGTTGCCTTTGCTGGAGATAGCGATTTAGGTCTTCATTATGTGCTGTCTGGGTGTGAGAATCTGAGGAAGCTAGAGATTAGGGACTGCCCCTTTGGTGACAAGGCCCTTTTGGCCAATGCTGCAAAGCTTGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTCAGTGAGTTATGGAGCATGTAAGCTACTTGGTCAGAAAATGCCCAGCCTCAATGTTGAAGTTATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGATAGTTGTCCTGTTGAGAAGCTTTATATATACAGGAGTATTGCTGGGCCAAGGTTGGACATGCCTGGTTTTGTGTGGACAATGGAGGATGATTCTTCACGAAGGCTTGAGCAATCCGCGGTGTATCGAGCCAAAGAATCTTTGTGA 1788 0.4508 MSKMMYSFPEEVLEYVFSFIQNDKDRNAISLVCKSWYEIERWCRKKIFIGNCYAVNPTTVIKRFPELRSIALKGKPHFADFNLVPEGWGGYVFPWIEAMAEGFPLLEEIRLKRMVVTDESLELIAKSFKNFKVLVLISCEGFTTDGLAAIASNCRNLKELNLQESEVEDLSGHWLCHFPDSYTSLVSLNISCLHNEVTLSALERLLGRCPNLQTLRLNHAVPLDKLPNILSRCPQLVELGTGVYSTEMRPEVFSNLVTAFSGCKHLKSLSGFWHVLPSYLPTVYPICSRLTSLNLSYAIIQSCDLVKLVGQCPNLLRLWVLDYIEDVGLDAVAASCKDLQELRVFPSDPFGLEPNIALTERGLVSVSEGCPKLQSVLYFCRQMSNAALNTIAQNRPNLTRFRLCILEPRTPDHLTLQPLDSGFGAIVEHCKDLQRLSMSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDLGLHYVLSGCENLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPSLNVEVIDERGPPDSRPDSCPVEKLYIYRSIAGPRLDMPGFVWTMEDDSSRRLEQSAVYRAKESL* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4580 595 Gene3D - 1 44 - -
Mal3g4580 595 SMART fbox_2 8 49 IPR001810 GO:0005515
Mal3g4580 595 Pfam F-box 6 46 IPR041567 -
Mal3g4580 595 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 5 576 - -
Mal3g4580 595 SMART LRR_CC_2 128 153 IPR006553 -
Mal3g4580 595 SMART LRR_CC_2 103 127 IPR006553 -
Mal3g4580 595 SMART LRR_CC_2 430 453 IPR006553 -
Mal3g4580 595 SMART LRR_CC_2 370 394 IPR006553 -
Mal3g4580 595 SMART LRR_CC_2 479 503 IPR006553 -
Mal3g4580 595 Gene3D Ribonuclease Inhibitor 45 575 IPR032675 -
Mal3g4580 595 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 5 576 - -
Mal3g4580 595 SUPERFAMILY F-box domain 4 39 IPR036047 GO:0005515
Mal3g4580 595 SUPERFAMILY RNI-like 31 532 - -
Mal3g4580 595 Pfam Transport inhibitor response 1 protein domain 65 111 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4580 Mal-Chr3 125607858 125611134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4580 K14485 - gmx:100816241 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4580 3 125607858 125611134 Mal1g1766 1 23073864 23076390 PCT