Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1766 ATGCAGAAAGTAGCGGCGTTATCGTACTCATTCCCCGAAGAAGTTCTCGAGCACGTTTTCTCATTCATTGAATCAACCAAAGACAGAGGCTCGATCTCTTTAGTATGCAAATCATGGTACGAGATCGAACGCTGGTGTCGCCGGCGAGTCTTCGTTGGAAACTGTTACGCTATCTCACCGGCGATGGTGATAAACCGGTTTCCGAAGGTGAGATCTATCACGTTGAAGGGAAAACCGCACTTTGCGGATTTCAATTTGGTGCCGGAAGGTTGGGGTGGTTATGTGTGTCCGTGGATCAAAGCTATGGCGGTGGCGTTTCCGTGTTTGGAAGAGATTAAGCTTAAGAGAATGGTTATTAGTGATGATTGTTTGGATTTGATTGCGAAATCGTTTAAGAATTTTAAGGTTTTGGTTCTTACTTCTTGTGAAGGTTTCACTACTGATGGACTTGCTTCCATTGCTGCTAATTGCAGGAATTTGAGGGAATTGGACTTGCGGGAGAGTGAAGTGGAGGACATTTGCGGTCATTGGCTAAGCCATTTTCCTGATTCATACACATCCTTGGTTTCCCTAAACATCTCTTGCTTAGCAAACGAGGTTAATTTTCCTGCCCTAGAGCGCTTGGTTAGTAGGTGTCCTAATATGCAGACTGTCCGCCTCAATCGTGCTGCGCCCCTTGATAAGCTGGCCAATCTTCTTCGTGGGGCTCCTCAGCTGGTTGAATTAGGCACCGGTGCTTACACAAGTGAGATGCGGCCGGAGGTCTTTACAAACCTGGTTGCAGCATTTTCTGGGTGCAAGCAAATGAAGAGCTTGTCTGGCTTTTGGGATGTGCTCCCATCCTACCTTCCCGCTGTCTATCCAGTATGCTCCAGACTCACATCACTAAATTTGAGTTATGCTACAATTCAAAGCCCGGATCTTATCAAGCTTGTTGGCCAATGCCAGAGTTTGCAGCGCTTATGGGTGCTGGATTACATAGAAGATGCCGGCCTTGACATGCTTGCTGCATCATGTAAGGATCTTAGGGAGTTGAGGGTGTTTCCTTCTGACCCATTTGGGTTGGAACCAAATGTAGCATTGACAGAGCAGGGCCTTGTTTCTGTGTCTGAAGGTTGCCCCAAGCTCCATTCTGTCCTATATTTTTGTCGTCAGATGACCAATGCTGCCCTAAATACAATTGCTCAGAACAGGCCTAATATGACCCGTTTTAGGCTATGTATTATCGAGCCTCGAACTCCTGACTATCTTACCCTTCAACCTCTGGATGCTGGTTTTGGAGCTATTGTTGAGCATTGTAAGGATCTTCAGCGCCTTTCCCTCTCAGGGCTTCTCACCGACCGTGTTTTTGAGTATATTGGGACTCATGCAAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGTGATCTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCTCTTTTAGCCAATGCTGCAAAGTTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTCAGTGAGTTATGGAGCATGTAAACTGTTGGGTCAGAAGTTGCCTAGACTCAATGTTGAAGTCATTGATGAAAGAGGACCTCCAAATTTAAGGCCAGATAGTAGTCCTGTTGAGAAACTATACATATACAGGACCATTTCTGGGCCTAGATTGGACATGCCTGGTTATGTATGGACAATGGAAGATGATTCTGCATATCTTGAATGA 1761 0.4628 MQKVAALSYSFPEEVLEHVFSFIESTKDRGSISLVCKSWYEIERWCRRRVFVGNCYAISPAMVINRFPKVRSITLKGKPHFADFNLVPEGWGGYVCPWIKAMAVAFPCLEEIKLKRMVISDDCLDLIAKSFKNFKVLVLTSCEGFTTDGLASIAANCRNLRELDLRESEVEDICGHWLSHFPDSYTSLVSLNISCLANEVNFPALERLVSRCPNMQTVRLNRAAPLDKLANLLRGAPQLVELGTGAYTSEMRPEVFTNLVAAFSGCKQMKSLSGFWDVLPSYLPAVYPVCSRLTSLNLSYATIQSPDLIKLVGQCQSLQRLWVLDYIEDAGLDMLAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCPKLHSVLYFCRQMTNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTLQPLDAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKLPRLNVEVIDERGPPNLRPDSSPVEKLYIYRTISGPRLDMPGYVWTMEDDSAYLE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1766 586 Pfam Leucine Rich repeat 290 311 IPR001611 GO:0005515
Mal1g1766 586 Pfam Transport inhibitor response 1 protein domain 68 114 IPR041101 -
Mal1g1766 586 SUPERFAMILY RNI-like 86 520 - -
Mal1g1766 586 Gene3D Ribonuclease Inhibitor 48 578 IPR032675 -
Mal1g1766 586 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 8 579 - -
Mal1g1766 586 Gene3D - 6 47 - -
Mal1g1766 586 SMART LRR_CC_2 131 156 IPR006553 -
Mal1g1766 586 SMART LRR_CC_2 373 397 IPR006553 -
Mal1g1766 586 SMART LRR_CC_2 157 194 IPR006553 -
Mal1g1766 586 SMART LRR_CC_2 482 506 IPR006553 -
Mal1g1766 586 SMART LRR_CC_2 433 456 IPR006553 -
Mal1g1766 586 SUPERFAMILY F-box domain 10 43 IPR036047 GO:0005515
Mal1g1766 586 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 8 579 - -
Mal1g1766 586 SMART fbox_2 11 52 IPR001810 GO:0005515
Mal1g1766 586 Pfam F-box 9 49 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1766 Mal-Chr1 23073864 23076390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1766 K14485 - gmx:100779337 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1766 1 23073864 23076390 Mal1g1766 1 23073864 23076390 ECH
Mal3g4580 3 125607858 125611134 Mal1g1766 1 23073864 23076390 PCT