Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4566 ATGAGAGGGCCAGTGATGGTGAGTGGTGGATGTGTGAAGGGAAGAAGAGGAAGCCGTGACAGCGGCGACGAAGTGTCGCCGACGCCTGCGGCTTTAATGTTGGCTGCTTTGAAGAAATCAATGGTGGCTTGTAGTATGGAGAGTCCTGACGATGTAATCTCCGCCGTTCATCATCCAATGGAGATTGGATGGCCTACAAATGTTAAACATGTCAGCCATGTCACTTTTGATCGGTTCAATGGATTTTTGGGTCTTCCTCTTGAGCTTGAGGTTCATGTTCCTGTTCCTGTCCCTAGTGCTAGTGTTAGTGTGTTTGGAGTCTCAGCAGAATCAATGCAATGTTCTTATGATTCAAAAGGAAACAGTGTCCCTACTATTCTGCTACTAATGCAGGAGAGATTATACTCACAAGGAGGACTAAAGGCTGAAGGAATCTTTCGTATAAATCCAGAAAATGGTGAAGAGGAGCATTTGAGGGAGCAATTGAATAGTGGCATTGTACCAAATGACATTGATGTTCATTGTTTGGCTGGTTTAATTAAAGCATGGTTTAGGGAACTTCCTTCAGGAGTGTTAGATGGACTTTCACCTGAGGAAGTTCTTGAATGCAACACTGAAGAAGAATCTGTTGAGCTTGTGAAGCAGTTGAAACCAGTTGAATCAGCTTTGCTTAATTGGGCTATTGATCTTATGGCTGATGTAGTAGTTGAAGAGGAGTATAATAAAATGGATGCTAGAAATATTGCAATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCACTAACTGCTCTAATGCATGCGGTCCAAGTGATGAATTTACTGAAAACACTGATATTGAAGACACTTCGAGACCGCGAAGAAACAGCAACATCAGAATATTCATCCATGTCACCTCATTCATCAGATGAATATGACAGTCAACAAGAAATGTATACTAGTGGTGAATTGAAAAGAACCAAATTAGATTATGATGATCATGTTGACTACAACCAAGAAGCTGCATCTGCTTTAAGTGAAATAGAAGAATGCTTCTTAGAACAATTGGATGATGATCAGTCAAAACAATTCACAGAAGAAAAACCTGCTGTGTATTTGCAAGAAGAGTTAGAGAGCCCTACCAAAACTGAGGATTCCTGTCTGAGTTCGAGTTATAGAGACGGCTCGACAACAACTGAGGGATCAAATGTTGACACAATCAGTCCATCAATAGAAAGTAAAGACACCAATGATGTGGAAATGGTAGATAAATTTAGTGATTCTGTTTCACTATTGCCTTTGTTTGCATCTAGTTAA 1299 0.4049 MRGPVMVSGGCVKGRRGSRDSGDEVSPTPAALMLAALKKSMVACSMESPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPVPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEESVELVKQLKPVESALLNWAIDLMADVVVEEEYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREETATSEYSSMSPHSSDEYDSQQEMYTSGELKRTKLDYDDHVDYNQEAASALSEIEECFLEQLDDDQSKQFTEEKPAVYLQEELESPTKTEDSCLSSSYRDGSTTTEGSNVDTISPSIESKDTNDVEMVDKFSDSVSLLPLFASS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4566 432 CDD CRIB 60 90 - -
Mal3g4566 432 ProSiteProfiles CRIB domain profile. 62 75 IPR000095 -
Mal3g4566 432 Gene3D Rho GTPase activation protein 94 286 IPR008936 GO:0007165
Mal3g4566 432 MobiDBLite consensus disorder prediction 293 311 - -
Mal3g4566 432 Pfam RhoGAP domain 124 258 IPR000198 GO:0007165
Mal3g4566 432 SUPERFAMILY GTPase activation domain, GAP 103 281 IPR008936 GO:0007165
Mal3g4566 432 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 430 - -
Mal3g4566 432 Pfam P21-Rho-binding domain 61 89 IPR000095 -
Mal3g4566 432 SMART RhoGAP_3 121 284 IPR000198 GO:0007165
Mal3g4566 432 Gene3D CRIB domain 57 93 IPR036936 -
Mal3g4566 432 MobiDBLite consensus disorder prediction 1 26 - -
Mal3g4566 432 PANTHER MKIAA1688 PROTEIN 1 430 IPR044785 GO:0005096
Mal3g4566 432 MobiDBLite consensus disorder prediction 366 410 - -
Mal3g4566 432 ProSiteProfiles Rho GTPase-activating proteins domain profile. 107 288 IPR000198 GO:0007165
Mal3g4566 432 MobiDBLite consensus disorder prediction 291 311 - -
Mal3g4566 432 MobiDBLite consensus disorder prediction 377 409 - -
Mal3g4566 432 SMART PBD_5 62 96 IPR000095 -
Mal3g4566 432 CDD RhoGAP 124 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4566 Mal-Chr3 125493089 125495869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4566 - K20642 gmx:100812700 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4566 3 125493089 125495869 Mal1g1775 1 23167241 23170489 PCT