LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g1775	ATGACGGGTCTTGTGATGGTAACAAGAGGCGGTGGATGCGGTGGAGGAAGCAAAAGAACAAGAGCAACACGAACAGAAGAAGAAGAAGAACAGCAGAACCAGCTTTCACTGGTTGCTTTGCTTTTGGCTGCAATAAGAAAATCTATGGTAGCATGCAGAGTAGACAGACCAGATCATGAAGTGATCTCAACCGTTCATCAAATGGAGATTGGATGGCCAACTGATGTTCAACATATTACTCATGTTACCTTTGACCGTTTCAATGGCTTTCTTGGTCTTCCTGTTGAGTTTGAGGTTGAGATCCCTGGTCGTGTTCCTAGTGCTAGTGTAAGTGTGTTCGGAGTCTCAGCAGAATCTATGCAGTGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTCATGCTAATGCAGGACCGTTTATATTCACAGGGAGGATTGAAGGCTGAAGGTATATTCCGCATAAACCCAGAAAATAGTAAGGAGGAGCATGTGAGGAACCAGTTGAATAGTGGTATTGTGCCTGGTGACATTGATGTCCACTGCTTGGCAGGACTAATCAAAGCCTGGTTCCGAGAGCTTCCTTCCGGAGTCCTAGATGGACTTTCCCCTGAGCAAGTTCTTGAGTGCAACACAGAAGAAGAATCTATTGAGCTTGTGAAGCGACTAAAGCCAACTGAGTCTGCCTTACTCAGCTGGGCTATCGATCTCATGGCTGATGTAGTTCAAGAAGAAGAGTATAACAAAATGAATGCAAGAAACATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTAACTGCTCTAATGCACGCGGTTCAAGTGATGAACTTGCTCAAGACATTGATAATAAAGACTCTTAGGGAACGTGAAGAAACAGCAACAGGTGGATATTCTCCCATGTCCTTTCGCACATCGTTTCGCCGTTCAGAGGATGAATATGACAGTCAGCGAGAAACAGCAACAGGTGGATATTCACCCATGTCCTATCGCTCATCGTATCGCCCGTCCGAGGATGAATACGACAGTCAACGAGAAATTGATGCAAGCGGTGAATTGAAAGGGACCAAATCGGATTATGATGATCATGCTCATTACAGAAATAGCAGTCAAGAGGAATTGGAGGCTGAATCTATGAGTGAGATAGAAGAATGCTTCTTAAAAAAATTGGATGAGCACACCAAAGAATTCTCAGAAGAACCTGAAAGTTGTCTGCAAGAGTATGTGAGCTCCAAAAGTTGCTGTGACTATAGTGTGGAACCTGCTGTATCAATTACTGATAGCAAAATTGTGAAGTCCTGCTTGAGTTTCGAGAGAGAAAAGTTAAATGCTGACACAACGATTCCTTTACGTCTAGGATGGACAGACACCGAAGATCTGGAGATAATTGATAAATTCACGGATTCTGTTTCACCGGTGCCGCTGCTTGCGTCTAGCTAA	1455	0.4371	MTGLVMVTRGGGCGGGSKRTRATRTEEEEEQQNQLSLVALLLAAIRKSMVACRVDRPDHEVISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILMLMQDRLYSQGGLKAEGIFRINPENSKEEHVRNQLNSGIVPGDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESIELVKRLKPTESALLSWAIDLMADVVQEEEYNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIIKTLREREETATGGYSPMSFRTSFRRSEDEYDSQRETATGGYSPMSYRSSYRPSEDEYDSQREIDASGELKGTKSDYDDHAHYRNSSQEELEAESMSEIEECFLKKLDEHTKEFSEEPESCLQEYVSSKSCCDYSVEPAVSITDSKIVKSCLSFEREKLNADTTIPLRLGWTDTEDLEIIDKFTDSVSPVPLLASS*	485

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g1775	484	CDD	CRIB	68	108	-	-
	Mal1g1775	484	Gene3D	Rho GTPase activation protein	102	296	IPR008936	GO:0007165
	Mal1g1775	484	PANTHER	RHO GTPASE ACTIVATION PROTEIN-RELATED	326	460	-	-
	Mal1g1775	484	PANTHER	RHO GTPASE ACTIVATION PROTEIN-RELATED	1	329	-	-
	Mal1g1775	484	SUPERFAMILY	GTPase activation domain, GAP	111	289	IPR008936	GO:0007165
	Mal1g1775	484	SMART	PBD_5	70	104	IPR000095	-
	Mal1g1775	484	MobiDBLite	consensus disorder prediction	299	380	-	-
	Mal1g1775	484	Pfam	P21-Rho-binding domain	69	98	IPR000095	-
	Mal1g1775	484	CDD	RhoGAP	132	290	-	-
	Mal1g1775	484	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	115	296	IPR000198	GO:0007165
	Mal1g1775	484	MobiDBLite	consensus disorder prediction	324	338	-	-
	Mal1g1775	484	Pfam	RhoGAP domain	132	266	IPR000198	GO:0007165
	Mal1g1775	484	PANTHER	MKIAA1688 PROTEIN	326	460	IPR044785	GO:0005096
	Mal1g1775	484	PANTHER	MKIAA1688 PROTEIN	1	329	IPR044785	GO:0005096
	Mal1g1775	484	MobiDBLite	consensus disorder prediction	340	379	-	-
	Mal1g1775	484	MobiDBLite	consensus disorder prediction	9	30	-	-
	Mal1g1775	484	Gene3D	CRIB domain	65	101	IPR036936	-
	Mal1g1775	484	SMART	RhoGAP_3	129	292	IPR000198	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g1775	Mal-Chr1	23167241	23170489	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g1775	-		-	mtr:MTR_1g089500	874.774

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g1775	1	23167241	23170489	Mal1g1775	1	23167241	23170489	ECH
	Mal3g4566	3	125493089	125495869	Mal1g1775	1	23167241	23170489	PCT