Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4440 ATGGCTTATCCTTACATTCTCTTTATCCTTTCTCTTCTCCTCACATTCTCTTCTTCCAACCCAAATCCAAACACCATCACCCTCCCTCTTTCTCCTCTATTCACTAAATCCCCATCCTCAGATCTCTTCCAATCTCTCAAAACAGCTGCTACATCTTCTCTAACAAGAGCACACCACCTCAAAACCCCAAAATCAAATCACAACAAATCCAAATCCTCTTCCTCCACCAACACACAAATTTTCTCCAAAAGCTATGGTGGTTACTCAATAAACCTCAATTTTGGAACACCACCACAAACCTTATCATTTGTACTTGACACAGGTAGCAGCCTTGTTTGGTTCCCCTGTTCCTCTCGCTACCTCTGTGCCAATTGCAACTTCCCAAACATCAACCCAACAAAAATCCCAATTTTCATCCCCAGAAACTCATCAACTGCAAAAATCCTAGGTTGCACAAACCCCAAATGCGGTTACATTTTTGACAAAGACATCGAATCTCGTTGCCGAGGTTGCAATCCACAAACTCAAAACTGTAACAACATCACTTGCCCTGCTTATATGGTTCAATATGGTTTAGGTTCAACCGCTGGTTTCTTACTACTAGATAACCTCGATTTTCCTGGAAAAACCGTAGCAAATTTTCTTGTTGGTTGTTCCATTTTATCTACACGACAACCCTCCGGCATCGCTGGATTCGGTCGCGGAGAAGATTCTCTTCCATCGCAAATGGGTCTCAAAAGATTCTCCTACTGTTTACTTTCTCATCAATTCGATGACTCGCCGGAAACTAGTGACCTCGTTTTGCAAGTTTCTTCCACCGGCGATACAAAAACAAACGGATTAAGCTACACACGGTTTCGAAAAAATCCTTCAACGAATAACACTGCATTTCTTGAATACTATTACGTGAATCTACGTAGTATCATCATCGGAGGAAAACGTGTTAAGATACCGGAAACAGGAACCGACGGTAATGGTGGCACTATCGTTGATTCTGGATCAACGTTCACATTCATGGAACGTGAAATCTTCGATTTGGTAGCAAAAGAATTCGAGAAGCAGCTTTCGAATTTCACTAGAGCGAAGAAGATTGAAGGTGAATCAGGGTTGAGTCTCTGTTTTGATTTCACCGGAGTGAAAACGGTACCGCCGATTCCAGAGCTAGTGTTTCAGTTTAAGGGGGGTGCAAAAATGAAGTTACCGGCTGAGAATTATTTTTCTTTAGTTGGTGAAGGTGAGGTTGCGTGTTTAACTTTTATAACTGATGGAGTTTCGGCGCCGGAGAGAAGTGGTGGTCCGGCGATTATTTTGGGAAATTATCAGCAGCAGAATTTTAATGTTGAGTATGATTTGGAAAATGATAGGTTTGGATTTGGACCTCAGAGATGTGAAAAAAGTGCTTAA 1404 0.4181 MAYPYILFILSLLLTFSSSNPNPNTITLPLSPLFTKSPSSDLFQSLKTAATSSLTRAHHLKTPKSNHNKSKSSSSTNTQIFSKSYGGYSINLNFGTPPQTLSFVLDTGSSLVWFPCSSRYLCANCNFPNINPTKIPIFIPRNSSTAKILGCTNPKCGYIFDKDIESRCRGCNPQTQNCNNITCPAYMVQYGLGSTAGFLLLDNLDFPGKTVANFLVGCSILSTRQPSGIAGFGRGEDSLPSQMGLKRFSYCLLSHQFDDSPETSDLVLQVSSTGDTKTNGLSYTRFRKNPSTNNTAFLEYYYVNLRSIIIGGKRVKIPETGTDGNGGTIVDSGSTFTFMEREIFDLVAKEFEKQLSNFTRAKKIEGESGLSLCFDFTGVKTVPPIPELVFQFKGGAKMKLPAENYFSLVGEGEVACLTFITDGVSAPERSGGPAIILGNYQQQNFNVEYDLENDRFGFGPQRCEKSA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4440 467 Pfam Xylanase inhibitor C-terminal 301 459 IPR032799 -
Mal3g4440 467 Gene3D Acid Proteases 69 263 IPR021109 -
Mal3g4440 467 SUPERFAMILY Acid proteases 84 463 IPR021109 -
Mal3g4440 467 ProSiteProfiles Peptidase family A1 domain profile. 88 459 IPR033121 -
Mal3g4440 467 PANTHER BNACNNG47670D PROTEIN 6 463 - -
Mal3g4440 467 PANTHER OS07G0603500 PROTEIN-RELATED 6 463 - -
Mal3g4440 467 PRINTS Pepsin (A1) aspartic protease family signature 94 114 IPR001461 GO:0004190|GO:0006508
Mal3g4440 467 PRINTS Pepsin (A1) aspartic protease family signature 328 339 IPR001461 GO:0004190|GO:0006508
Mal3g4440 467 CDD pepsin_A_like_plant 87 463 IPR034161 -
Mal3g4440 467 Pfam Xylanase inhibitor N-terminal 88 260 IPR032861 -
Mal3g4440 467 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 103 114 IPR001969 GO:0004190|GO:0006508
Mal3g4440 467 Gene3D Acid Proteases 273 465 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4440 Mal-Chr3 124032563 124033966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4440 86 465 Miscellaneous Gene Families AT1G77480 23.671 7.67e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4440 - - gmx:100805927 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4440 3 124032563 124033966 Mal3g4440 3 124032563 124033966 ECH
Mal3g4440 3 124032563 124033966 Mal1g3355 1 55800881 55802226 PCT