Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3355 ATGACTTCTCCCAACATTTTCTATCTACTCCAATTCCTTTCCATACTCATCTTCGCTTATTCATCATCAAACACCATAACCATTCCAATCTCTCCCATATTCACCAACCACCCATCCTCAAATCCCTTCCAAACCCTCAAACCACTTTCCTCAACTTCCCTCACAAGAGCCCACCACCTAAAACACCACAAAAAACCTCACACAAATCCATGTCACACACAAATCCATCCCAAAAGCTACGGTGCATACTCCATCAATCTCAAATTTGGAATACCACCTCAGACATTCTCATTCATACTAGACACCGGAAGCAACCTTGTTTGGCTTCCATGCTCCTCTCATTACCTTTGTTCCAAATGCAACTCATTCCCAAACAAAATCTCTAAATTCAACCCTAAAAATTCAACCTCATCAAAACTCATTGGTTGTAATAATCCAAAATGTGCTTGGGTTTTTGTCCAATACGGAACCGGCTCAACTTCCGGCTTCTTACTCTCGGAAAATCTCAACCTCGCCGGAAAAGTTTTCTCTGATTTTCTCATCGGCTGCTCCGTCGTTTCAATTTATCAACCCACTGGAATCACTGGATTCGGCCGTGGACCGGAGTCGGTACTGTCACAGATGAGGTTGAAAAGATTCTCATTCTGTTTGGTTTCTCACCGGTTCGATGACTTGCCGGAGAGTAGCGAGCTTGTTCTGTATAACTCCACCGGCGATGAGAAATCCAACGGTCTCACTTACACGCCGTTTATGAATAACCGGGAAAATGTGGTTTTGAGAAGTTACTATTATATCACTCTTTGGGTTCCGAGTAGATATTTGAAACCAGATATTAACGGTAACGGTGGAACTATTATAGACACTGGGTCCACTTTTACGTTTATGGAAAGGTCCATTTTTGATTTGGTGGCCCAAGAGTTTGAGAAGCATCAATCAGGGTTGAGTCCTTGTTTTAATGTGTTGGGGAATAAAACGACGTCGTTTCCGGGGCTTACGTTTTGGTTTAAGGGTGGGGCTAAGATGAGGTTGCCGGTGGTGAATTATTTTTCGTTTATTGGGAAATATGATGTGGCGTGTTTGACGATTGTGTCTAATGAGGTGGTGGGTTTAGATGGACCGACGGTGATATTGGGAAATTATCAGCAGCAGAATTTGTATGTTGAGTATGATTTGGAAAATGAGAGGTTTGGGTTCCGAAGTCAGAGTTGCGAAAAAAATGTTTAG 1224 0.4257 MTSPNIFYLLQFLSILIFAYSSSNTITIPISPIFTNHPSSNPFQTLKPLSSTSLTRAHHLKHHKKPHTNPCHTQIHPKSYGAYSINLKFGIPPQTFSFILDTGSNLVWLPCSSHYLCSKCNSFPNKISKFNPKNSTSSKLIGCNNPKCAWVFVQYGTGSTSGFLLSENLNLAGKVFSDFLIGCSVVSIYQPTGITGFGRGPESVLSQMRLKRFSFCLVSHRFDDLPESSELVLYNSTGDEKSNGLTYTPFMNNRENVVLRSYYYITLWVPSRYLKPDINGNGGTIIDTGSTFTFMERSIFDLVAQEFEKHQSGLSPCFNVLGNKTTSFPGLTFWFKGGAKMRLPVVNYFSFIGKYDVACLTIVSNEVVGLDGPTVILGNYQQQNLYVEYDLENERFGFRSQSCEKNV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3355 407 PANTHER BNACNNG47670D PROTEIN 153 403 - -
Mal1g3355 407 PANTHER BNACNNG47670D PROTEIN 7 151 - -
Mal1g3355 407 PANTHER OS07G0603500 PROTEIN-RELATED 153 403 - -
Mal1g3355 407 PANTHER OS07G0603500 PROTEIN-RELATED 7 151 - -
Mal1g3355 407 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Mal1g3355 407 PRINTS Pepsin (A1) aspartic protease family signature 284 295 IPR001461 GO:0004190|GO:0006508
Mal1g3355 407 PRINTS Pepsin (A1) aspartic protease family signature 375 390 IPR001461 GO:0004190|GO:0006508
Mal1g3355 407 SUPERFAMILY Acid proteases 79 403 IPR021109 -
Mal1g3355 407 Pfam Xylanase inhibitor N-terminal 83 220 IPR032861 -
Mal1g3355 407 Gene3D Acid Proteases 233 407 IPR021109 -
Mal1g3355 407 ProSiteProfiles Peptidase family A1 domain profile. 83 399 IPR033121 -
Mal1g3355 407 CDD pepsin_A_like_plant 82 403 IPR034161 -
Mal1g3355 407 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
Mal1g3355 407 Pfam Xylanase inhibitor C-terminal 269 399 IPR032799 -
Mal1g3355 407 Gene3D Acid Proteases 56 224 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3355 Mal-Chr1 55800881 55802226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3355 48 405 Miscellaneous Gene Families AT1G44130 25.298 1.01e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3355 - - gmx:100808552 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4440 3 124032563 124033966 Mal1g3355 1 55800881 55802226 PCT