Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4343 ATGAGTGAACAACAAAGCAACAGCAACAACCAGTTGGTGGTGCAGAATTCAGGTAGTTTGAGCTTTAGCAGCCATTTGTCTAAGGAAGATGAAGAGATGTCAAAATCTGCTCTATCAACTTTTAGGGCTAAAGAAGAAGAAATTGAAAAGAAGAAGATGGAAGTTAGAGAGAAGGTTCAGTTTCAGTTGGGTCGTGTTGAAGAAGAAACTAAACGTCTTGCTACCATTCGTGAGGAATATCAGGAGCTTGAAGCCCTTGCAGATCCAATGAGGAAAGAAGTTTCAGTAGTCCGAAAGAGAATTGATTCAGTAAACAAAGAATTAAAACCACTTGGTCATACTTGTCAGAAGAAAGAGAAAGAATACAAAGATGCCCTTGAAGCTTTCAATGAAAAGAACAGGGAAAAAGTACAGCTAATTAGTAAATTAATGGAGCTGGTGGGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATTCCATGCAAATGCAATGA 516 0.3876 MSEQQSNSNNQLVVQNSGSLSFSSHLSKEDEEMSKSALSTFRAKEEEIEKKKMEVREKVQFQLGRVEEETKRLATIREEYQELEALADPMRKEVSVVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNEKNREKVQLISKLMELVGESERLRMKKLEELSKNIDSMQMQ* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4343 171 MobiDBLite consensus disorder prediction 1 24 - -
Mal3g4343 171 MobiDBLite consensus disorder prediction 1 41 - -
Mal3g4343 171 Coils Coil 66 93 - -
Mal3g4343 171 PANTHER EXPRESSED PROTEIN 10 168 - -
Mal3g4343 171 MobiDBLite consensus disorder prediction 25 41 - -
Mal3g4343 171 Coils Coil 38 58 - -
Mal3g4343 171 Pfam Transcriptional activator 15 167 IPR007033 -
Mal3g4343 171 Coils Coil 115 135 - -
Mal3g4343 171 PANTHER RAB6-INTERACTING PROTEIN GORAB 10 168 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4343 Mal-Chr3 122904381 122906410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4343 - - gmx:100527015 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4343 3 122904381 122906410 Mal1g1952 1 25640682 25641831 ECH
Mal3g4343 3 122904381 122906410 Mal3g4343 3 122904381 122906410 ECH
Mal3g4343 3 122904381 122906410 Mal4g0821 4 9813517 9815202 ECH