Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1952 ATGTGTCTAATTTGCAGAAAGAGAGAAAAAATGCAGAAAATGAAGAATCTTGGGAGTATTGGAAGCAGTGGGAGGTTTTCAACAGAGGAGTGTGAAGAGGAGGATGTTTCAAAAGTGGCCATTTCCACATTACAAGCTAAGGAAGAAGAGATTGAGAGAAAAAAGATGGAGGTGAAAGAGAGAGTTGAACTTCAACTTGGACGCGCTGAAGAAGAGACGAGGCGCTTGGCTCACATTTGGGAAGAGCTTGAAGTGATGGAAGATCCTATGAGGAAGGAAGTTGCAATGGTGCGTAAGAAAATTGACTTGACTAACAAAGACTTAAAGCAACTTGGACAGAACTACCAGAAAAAGGAGAAAGAGTATAAAGAAGCGTTGGAAGCTTTCAATGAAAAGAACAAAGAGAAGAATCAATTGGTAGCGACACTAACTGAGCTGCTGACTGAGAGTGAAAGAACGAGGATGAAGAAACTGGAGGATCTATGCAAGACCATAGAATCTGTGTCACTAAAACAATAA 519 0.4066 MCLICRKREKMQKMKNLGSIGSSGRFSTEECEEEDVSKVAISTLQAKEEEIERKKMEVKERVELQLGRAEEETRRLAHIWEELEVMEDPMRKEVAMVRKKIDLTNKDLKQLGQNYQKKEKEYKEALEAFNEKNKEKNQLVATLTELLTESERTRMKKLEDLCKTIESVSLKQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1952 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 168 - -
Mal1g1952 172 Coils Coil 101 146 - -
Mal1g1952 172 Coils Coil 41 64 - -
Mal1g1952 172 Pfam Transcriptional activator 15 167 IPR007033 -
Mal1g1952 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 168 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1952 Mal-Chr1 25640682 25641831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1952 - - gmx:100794044 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4343 3 122904381 122906410 Mal1g1952 1 25640682 25641831 ECH
Mal1g1952 1 25640682 25641831 Mal1g1952 1 25640682 25641831 ECH