Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4013 ATGGATTCCATGCTTAACCTCCGTCACTCCAACCTCTCACTCAATCACAACCGTCCATCCTTCCCCTTATCACCCTCCCTCTCCTTCCGTTCTCTCCCACCACCACAATTCCTCCCTCCATCGTCGTTTAAGCTTCCACCAATCAAATCCTCATCCTCTCAAAACGACCCTGCGTTTCAAAAACCCCAAAATAACCCTACTCCATCAAACCCTTTCCAAACCCTAACCTCTCTCTTCTCCCCCGTCGTTGAAACCACCGTCATCGTCATCGCCGCTACCGCTTTCTTCTTCATGCGTTTCCATCACACTCCCGTCATCGCCGCCACTCTCTCTCCTCCCGCCACCGTAACGGAAAACAAATCGACTGAAGCGGAAGAAGCGGAGAAGGTGATTGAAGAGAAATTGACCGAAAATCCAAACGACGCGGAAGCTCTACGTGCTTTAATGGAGGTGAAAATCAAAGCAAGAAAAATTGATGAAGCGATTGGTGTTATAGACCGTTTGATTGAGATCGAACCTGAAGAAATGGAATGGCAATTGTTGAAGGCGAACATGTATATCTACAACGACAACTATGAATCCGCGAAGAAATTGTTTGAAGAGATTTTGAAGAAAGATCCTCTACGAGTTGAAGCTTTTCACGGTCTTGTGATGGCAAGTTCCGAATCAAATTCGGAATCGATTGAACCGTTGAAAGAATTGTCGATGAGAGTTGAAAAAGCAATGGAATTGTGCAAGAAACAGAAGAAGGGTTCAGATGTTAGGGATTTTAGGTTATTGGTTGCTCAGATTAAGGTGATGGAAGGGAATTTTTCGGAGGCGCTAAAAGCTTATCAGGATTTGGTGAAAGAAGAACCAAGAGATTTTAGGCCTTATTTGTGTCAGGGTATTATATATACCTTGCTTAGAAAGAAAGATGAAGCGGAGAAGCAATTCGATCAGTTTCGAAGGCTTGTTCCCAAGAATCATCCTTATAAAGAGTATTTTGATGATAACATGTATGGTACCAATCTTTTTGCGCAGAAGTTCGATAGGGAAGGAGCTGGTGCTAGGAGTTGA 1059 0.4391 MDSMLNLRHSNLSLNHNRPSFPLSPSLSFRSLPPPQFLPPSSFKLPPIKSSSSQNDPAFQKPQNNPTPSNPFQTLTSLFSPVVETTVIVIAATAFFFMRFHHTPVIAATLSPPATVTENKSTEAEEAEKVIEEKLTENPNDAEALRALMEVKIKARKIDEAIGVIDRLIEIEPEEMEWQLLKANMYIYNDNYESAKKLFEEILKKDPLRVEAFHGLVMASSESNSESIEPLKELSMRVEKAMELCKKQKKGSDVRDFRLLVAQIKVMEGNFSEALKAYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFDQFRRLVPKNHPYKEYFDDNMYGTNLFAQKFDREGAGARS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4013 352 MobiDBLite consensus disorder prediction 43 72 - -
Mal3g4013 352 ProSiteProfiles TPR repeat profile. 142 175 IPR019734 GO:0005515
Mal3g4013 352 Gene3D Tetratricopeptide repeat domain 253 348 IPR011990 GO:0005515
Mal3g4013 352 SUPERFAMILY TPR-like 122 318 IPR011990 GO:0005515
Mal3g4013 352 Gene3D Tetratricopeptide repeat domain 117 250 IPR011990 GO:0005515
Mal3g4013 352 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 7 332 - -
Mal3g4013 352 SMART tpr_5 176 209 IPR019734 GO:0005515
Mal3g4013 352 SMART tpr_5 289 322 IPR019734 GO:0005515
Mal3g4013 352 SMART tpr_5 255 288 IPR019734 GO:0005515
Mal3g4013 352 SMART tpr_5 142 175 IPR019734 GO:0005515
Mal3g4013 352 Pfam Tetratricopeptide repeat 268 321 - -
Mal3g4013 352 Pfam Tetratricopeptide repeat 125 184 - -
Mal3g4013 352 MobiDBLite consensus disorder prediction 45 72 - -
Mal3g4013 352 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 7 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4013 Mal-Chr3 118621537 118622595 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4013 - - gmx:102661172 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4013 3 118621537 118622595 Mal1g2942 1 42536576 42537628 PCT