Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2942 ATGAATTCTCTCCCCAAAACCCATCACTATCCTCACCTCTCTTTCACCCACCGCCACTCTTCATTCCCAACACCTTTCTCTACATTCTCTTTCCCCTCTCTACCTTCTCACCAATTCTCTTCTTCATCCTTATCCATCAAAGCCTCATCCTCACCAAAAAATAACAACCACCCTTTTCAAAAACCCCAAAACCCTTTTTTCCAATTTCTCAAAACCCTAAACCCCATTTTCTCACCTCTCTTCGAACCCGCATACGTTGCAGTAGCAGTTCTCGCTTTCTTCTTGTTTCGCTTTCAACACAATCCCGCCACCGCCACGTCAGCACTCCCACCACCACCACCAGCACAATCCTCCACCGCCACAACCACCGAATCATTATCAAATAAAGAAAATGATACTTCAATTGAAGAGAAATTGAGTAAAATTTCTAACGATGCAAACGCTCTTAGGTCACTCGTGGAGGAGAATGTCAAAACACGCAAACTAAGTGAAGCGATTCGTGTTGTGGATCGATTAATCGAACTTGAACCGGAGGAATTTGATTTGTTACTACTAAAAGCACATTTGCATAGTCATAACGGTGAACATGAATTGGCTAAGAAAGGATTTGAATTTACTTTGAAGCAGGATCCGTTTAATTCGGAGGCTTATCGTGGTCTTTTGATGGCGAATTCGGAGTTGAAGGAGCCAATGGAAGGTTTTTTGAATAGGGTTGATGAGGTGGTGAAGTTTTTTGAGGAGAAAGAGATGGAGTCGGAAGCTAGGGAATTTAAGCTTTTGATTGCGCAGGTGAAGGTGATGGAAGAGGATTATTCGGGTGCATTGAAGGTGTATGAGGAAATTGTGAAGGAAGAACCGAGTGATTTTAGGCCTTATTTGTGTCAGGGTGTTGTGTATAGTTTGCTTAGGAAAAATGATGAAGCTGAGAAACAGTTTGAAGAGTATAGGAAACTAGTTCCGGAGAATCATCCTTATAAGGAATATTTTGAGGATAATGCAAAGGTTTTGTCGACGAAGCTAGAGAAGGGAGGAGTAGAAGAAGCAAAGATTTGA 1053 0.4198 MNSLPKTHHYPHLSFTHRHSSFPTPFSTFSFPSLPSHQFSSSSLSIKASSSPKNNNHPFQKPQNPFFQFLKTLNPIFSPLFEPAYVAVAVLAFFLFRFQHNPATATSALPPPPPAQSSTATTTESLSNKENDTSIEEKLSKISNDANALRSLVEENVKTRKLSEAIRVVDRLIELEPEEFDLLLLKAHLHSHNGEHELAKKGFEFTLKQDPFNSEAYRGLLMANSELKEPMEGFLNRVDEVVKFFEEKEMESEAREFKLLIAQVKVMEEDYSGALKVYEEIVKEEPSDFRPYLCQGVVYSLLRKNDEAEKQFEEYRKLVPENHPYKEYFEDNAKVLSTKLEKGGVEEAKI* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2942 350 MobiDBLite consensus disorder prediction 105 135 - -
Mal1g2942 350 SMART tpr_5 289 322 IPR019734 GO:0005515
Mal1g2942 350 SMART tpr_5 146 179 IPR019734 GO:0005515
Mal1g2942 350 SMART tpr_5 180 213 IPR019734 GO:0005515
Mal1g2942 350 SMART tpr_5 255 288 IPR019734 GO:0005515
Mal1g2942 350 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 343 - -
Mal1g2942 350 Gene3D Tetratricopeptide repeat domain 105 339 IPR011990 GO:0005515
Mal1g2942 350 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 343 - -
Mal1g2942 350 Coils Coil 298 318 - -
Mal1g2942 350 SUPERFAMILY TPR-like 145 324 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2942 Mal-Chr1 42536576 42537628 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2942 - - cam:101497721 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4013 3 118621537 118622595 Mal1g2942 1 42536576 42537628 PCT