Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3964 ATGTCAGGTGAATTCCTTCCTGAAAATTCCATTGTGGTGGGGTGTGGAGCAGTGGGGTTGGATTTGTTGGCTACCGTTGCTGCTTTTCCAAAGCCAGATCAAAAAATTAGAAGCACTTCCTTCAAGACTCAAGGAGGCGGCAACACAGGCAATGCCTTAACCTGCGCGGCTCGCTTGGGCCTCAAGCCAAGGATCATCTCCAAGGTTGCAGATGACACTCAAGGAAGGAGCATATTAGATGAATTGCAAGCTGATGGTGTAGATACCTCCTTTATAGTGGTATCTAAGGAAGGAACTTCACCATTTACATATATCATTGTTGACAACCAAACCAAGTCGCGTACTTGTATACATACGCCGGGATTTCCTCCCATGAAACCAGATGATCTTCCTGAATCAAGTTTATTATCTGCATTGAATGGAGCGAGAATTGCTTATTTTGATGGGAGATTGCATGAAACTGCTCTGGTTGTTGCGCACGAGGCAGTTAAGAAGAATGTACCTATCTTAATGGACGCAGAAAGGCTAAGAGAAGGGTTGGATGATCTCTTAAAAGTAGTTGATTATGTCGTATGCGCAGCACAGTTTCCACAGGTATGGACAGAGGCAGCATCTGTTCCAAAAGCACTTGTTTCTATGCTTCTAAGGTTGCCCAAAGTCAAATTTGTTATTGTAACTTTGGGAAGAGATGGTTGCATAATGCTTGAGAGAAGTGCTAATGAGGTTCCATCTACAGAAGAAATGGATGTTGACAAGTTACTGGAATCTCTGGAAACAAGGAAAAATGGGAGCATATGCGTCCCAACTTGCATATCCTCGTCGGTGACTAAATTGCGAGCAGAAGGTATAGGAACAATTTGTGGTAGGCTATACATTGGAACAGCTGAAACCATACCACCATCAGAGCTTATTGATACCACTGGTGCCGGTGATGCATTCGCCGGAGCTGTTCTCTACGCTATCTGCGCCAACTTTGCACCAGAGAAAATGCTATGCTTTGCTGCTAATGTGGCAGCTGCCAAGTGCAGAGCACTAGGGGCGCGGAGTGGTCTTCCTTACCACACTGACCAGCGCCTCACGTCCTTCATGCAGTAG 1095 0.4548 MSGEFLPENSIVVGCGAVGLDLLATVAAFPKPDQKIRSTSFKTQGGGNTGNALTCAARLGLKPRIISKVADDTQGRSILDELQADGVDTSFIVVSKEGTSPFTYIIVDNQTKSRTCIHTPGFPPMKPDDLPESSLLSALNGARIAYFDGRLHETALVVAHEAVKKNVPILMDAERLREGLDDLLKVVDYVVCAAQFPQVWTEAASVPKALVSMLLRLPKVKFVIVTLGRDGCIMLERSANEVPSTEEMDVDKLLESLETRKNGSICVPTCISSSVTKLRAEGIGTICGRLYIGTAETIPPSELIDTTGAGDAFAGAVLYAICANFAPEKMLCFAANVAAAKCRALGARSGLPYHTDQRLTSFMQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3964 364 CDD ribokinase_group_B 11 353 - -
Mal3g3964 364 SUPERFAMILY Ribokinase-like 12 354 IPR029056 -
Mal3g3964 364 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 305 318 IPR002173 GO:0016773
Mal3g3964 364 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 6 363 - -
Mal3g3964 364 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 6 363 - -
Mal3g3964 364 PRINTS Ribokinase signature 223 234 IPR002139 GO:0016301
Mal3g3964 364 PRINTS Ribokinase signature 41 60 IPR002139 GO:0016301
Mal3g3964 364 PRINTS Ribokinase signature 14 35 IPR002139 GO:0016301
Mal3g3964 364 Pfam pfkB family carbohydrate kinase 16 243 IPR011611 -
Mal3g3964 364 Pfam pfkB family carbohydrate kinase 296 352 IPR011611 -
Mal3g3964 364 Gene3D - 11 349 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3964 Mal-Chr3 117890423 117894076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3964 - - ccaj:109795876 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3964 3 117890423 117894076 Mal3g3964 3 117890423 117894076 ECH
Mal3g3964 3 117890423 117894076 Mal1g2590 1 35764308 35769881 PCT