Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2590 ATGTCCAATCTCTATACAGCTGCTTCTGCTTCTTCATCATCGTTCATGTTCAACGTTCAACCTCTCAATTTCTACAATTCAACAAGGAATCCTCGCTGCAGAAATTTGAGGGTCAAAATGTGCTCCTCCTCTTCCTCCATTCCTCAAAACGCCACCGTTGTGGGTTGTGGATCAGTCACCGTCGATTTCTTGGCTACCGTTGCTGCTTACCCTAAGCCAGATGACAAAATCAGAACCACCACCTTCAAGGTTCAAGGAGGTGGTAATGCTGGCAATGCTTTAACTTGCCTTGCTCGTTTAGGCCTAAACACAAGGCTCATTTCTAAGATTGCGGATGACAGCCCAGGAAGGGGCATATTAGATGAGCTACGGACTGATGGTGTAGATACATCTTTTATTGTGGTATCTAAAGAGGGAACTTCACCATTTACATATATTATTGTGGACAATGAAACGAAGACTCGAACTTGTATACATACCCCTGGATATCCTCCAATGATACCCCAAGATCTTTCAGAATCCAGTTTGTTATCTGCATTGGATGGAGCAAGCATTGTATATTTTGATGGGAGATTGTATGAAACTGCTCTAGTTGTTGCCCATGAGGCAGCTAGGAAGAATATACCCATCTTAATTGATGCAGAAAGGCCGAGGGAAGGGTTGGATGATCTCCTGAAATTAGCTGATTATGTTGTATGCTCATCTAAATTTCCAAAGGCATGGACAGAGGCATCAACTGTTCCACAAGCACTTGTTTCTATCCTTTTAAGGTTGCCTAACGTAAAATTTGTGGCTGTAACTTTGGGAAAAGATGGTTGTATAATGCTTGAGAGAAGTGTTAATGCAAGTCCTTCCACAGAAGAAGTGGATGTAGACAACTTATTGGAATCGCTGGAGTTAAGAAAGGATAAGAGTGCATCAATTCCAACCTGCATATCGTCGTCAGTGGCAAAATTAAAGGCAGAAGGAATAGGAACGGTTACCGGGAAACTATATGTTGGTACAGCTGAGAGCATTCCACCATCGGAGCTTGTTGATACCACTGGTGCCGGGGATGCATTTATTGGATCTGTGATCTATGCTATATGTTCGAAGTTCTCACCAGAGACAATGCTACCCTTTGCTGCTAATGTGGCAGGTGCCAAGTGCAGGGATCTAGGAGCACGAAGCGGTCTTCCATACCGTGCAGACCCACGCCTAGCATCCTTTATTCAGTAG 1218 0.4376 MSNLYTAASASSSSFMFNVQPLNFYNSTRNPRCRNLRVKMCSSSSSIPQNATVVGCGSVTVDFLATVAAYPKPDDKIRTTTFKVQGGGNAGNALTCLARLGLNTRLISKIADDSPGRGILDELRTDGVDTSFIVVSKEGTSPFTYIIVDNETKTRTCIHTPGYPPMIPQDLSESSLLSALDGASIVYFDGRLYETALVVAHEAARKNIPILIDAERPREGLDDLLKLADYVVCSSKFPKAWTEASTVPQALVSILLRLPNVKFVAVTLGKDGCIMLERSVNASPSTEEVDVDNLLESLELRKDKSASIPTCISSSVAKLKAEGIGTVTGKLYVGTAESIPPSELVDTTGAGDAFIGSVIYAICSKFSPETMLPFAANVAGAKCRDLGARSGLPYRADPRLASFIQ* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2590 405 SUPERFAMILY Ribokinase-like 51 397 IPR029056 -
Mal1g2590 405 Gene3D - 51 390 IPR029056 -
Mal1g2590 405 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 39 405 - -
Mal1g2590 405 CDD ribokinase_group_B 53 394 - -
Mal1g2590 405 Pfam pfkB family carbohydrate kinase 330 393 IPR011611 -
Mal1g2590 405 Pfam pfkB family carbohydrate kinase 53 280 IPR011611 -
Mal1g2590 405 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 39 405 - -
Mal1g2590 405 PRINTS Ribokinase signature 264 275 IPR002139 GO:0016301
Mal1g2590 405 PRINTS Ribokinase signature 55 76 IPR002139 GO:0016301
Mal1g2590 405 PRINTS Ribokinase signature 82 101 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2590 Mal-Chr1 35764308 35769881 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2590 - - mtr:MTR_1g069320 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3964 3 117890423 117894076 Mal1g2590 1 35764308 35769881 PCT