Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3958 ATGGCTTCAGATTCCAATTCAAACCTTAGAATCACCATTGAAAGAAATCCTTCTCAGTCACGTTTAGCTGAATTGAACATCAAGTGCTGGCCCAAATGGGGTTGTTCTCCAGGAAAGTACCAACTGAAATTTGATGCAGAAGAAACATGCTATTTATTGAAAGGGAAAGTGAAAGCATACACAAAAGGGACATCAGATTTTGTAGAGTTTGGAGCTGGAGACCTTGTCACCATTCCAAAAGGACTCAGTTGTACTTGGGATGTTTCTGTTGCTGTTGACAAGTACTACAAATTTGAATCATCTTCTTCTTCATCATCATCTTCACCATCTTGTTAA 336 0.3869 MASDSNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGTSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESSSSSSSSSPSC* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3958 111 Gene3D Jelly Rolls 2 98 IPR014710 -
Mal3g3958 111 SUPERFAMILY RmlC-like cupins 20 96 IPR011051 -
Mal3g3958 111 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Mal3g3958 111 PANTHER OS04G0445200 PROTEIN 2 105 - -
Mal3g3958 111 CDD cupin_TM1112-like 30 98 - -
Mal3g3958 111 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3958 Mal-Chr3 117814691 117815131 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3958 - - gmx:100793722 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3958 3 117814691 117815131 Mal3g3958 3 117814691 117815131 ECH
Mal3g3958 3 117814691 117815131 Mal1g2580 1 35659775 35660375 PCT