Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2580 ATGGCTTCTGATTCCAATTCAAACCTTAGAATCACAATTGAAAGCAATCCTTCAGAATCACGCCTAGCTGAATTGAACATCAAGTGCTGGCCCAAATGGGGGTGTTCACCAGGTAAATATCAATTAAAGTTTGATGCAGAGGAGACATGCTATTTGTTGAAAGGAAAGGTAAAAGTATACAAAAAAGGGTCATCAGAGTTTGTAGAGTTTGGTGCTGGAGATCTTGTGACAATTCCAAAAGGACTAAGTTGTACTTGGGATGTTTCTATTGCTGTTGATAAGTACTACAAATTTGAAGCTTCATCTTCTTAA 312 0.375 MASDSNSNLRITIESNPSESRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKVYKKGSSEFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFEASSS* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2580 103 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 103 - -
Mal1g2580 103 Gene3D Jelly Rolls 2 98 IPR014710 -
Mal1g2580 103 SUPERFAMILY RmlC-like cupins 28 88 IPR011051 -
Mal1g2580 103 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Mal1g2580 103 CDD cupin_TM1112-like 30 98 - -
Mal1g2580 103 PANTHER OS04G0445200 PROTEIN 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2580 Mal-Chr1 35659775 35660375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2580 - - gmx:100793722 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2580 1 35659775 35660375 Mal1g2580 1 35659775 35660375 ECH
Mal3g3958 3 117814691 117815131 Mal1g2580 1 35659775 35660375 PCT