Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3794 ATGGAAGCAAATATTTTTAGGCAGCAGAACAGAATTTCAACACTAACTTCAACTCACTACAACCTCATCAAACATAAACCTCAACATCCACCTTCTATAGTTGCTGTGCTTAGAAATCCTTCAAATCACAACATTACAGAAGAAACAACAAAAAATAGTTCTAATGTCTACAAAGATAGCTGGTTTGATCTCATAGCAATAAACCATTTATCAAAAACCGTTCAAGTTGCCACAGGACTGAGTAATAATAAGAGTGGCTATGAGAGCCTTGTTGAGGCAGCTACTATGGCAAAACAGAAATTTAATGCGATTCAACAGCAAGAAGTTGTCATTCAAGCTCTAGATAGACTCTTCCCACAATTTCTATTTGCATTGATAAAGAAACAGCCACTACCACCTAAATTCACAAGGCAAATTTTTGCAATTTTCACCACCATGTTCTTTACTTGGTTACTTGGGCCCTCCGAGGTGAGAGAATCGGAGATCAACGGGAGAATAGAAAAAAATGCAGTCTACATAAAAAAATGCAGGTTTTTAGAGGAGACAAATTGTGTAGGGATGTGTATTAATATGTGCAAAATTCCAACTCAATCGTTTATAAAGAACTCTCTGGGTATGCCTGTCAACATGGTACCAAATTTTGACGACATGAGTTGTGAGATGATATTTGGGCAGGACCCTCCAGCATCAATTGATGATCCATCACTGAAGCAACCATGCTATAAACAATGCAAGGCATATAAAAGTCATGGAACAGATTGCCTCAGTTAA 771 0.3748 MEANIFRQQNRISTLTSTHYNLIKHKPQHPPSIVAVLRNPSNHNITEETTKNSSNVYKDSWFDLIAINHLSKTVQVATGLSNNKSGYESLVEAATMAKQKFNAIQQQEVVIQALDRLFPQFLFALIKKQPLPPKFTRQIFAIFTTMFFTWLLGPSEVRESEINGRIEKNAVYIKKCRFLEETNCVGMCINMCKIPTQSFIKNSLGMPVNMVPNFDDMSCEMIFGQDPPASIDDPSLKQPCYKQCKAYKSHGTDCLS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3794 256 PANTHER BETA-CAROTENE ISOMERASE D27 1 252 IPR038938 -
Mal3g3794 256 Pfam Beta-carotene isomerase D27-like, C-terminal 150 229 IPR025114 GO:0005506
Mal3g3794 256 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3794 Mal-Chr3 115608599 115613182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3794 K17911 - gmx:100813404 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3794 3 115608599 115613182 Mal1g2402 1 32343231 32347309 PCT