Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2402 ATGGATGCAAAAATGATGATTGCACATAACATGAGTCTAACACCAACTTTAGCTCAGTGGAGGAAGCTAAGATTTGAACCAAAACGCACTTTTGTAGTTGGAGTTCTTGCAAGGCCAACAAATGACATTTCAGATGAAACATTAAGAAAAACTAATGTATACAAAGATAATTGGTTTGATAAATTAGCTATAAACCATTTATCAAAAAGTGTTCAAGCAGCTACAGGAGTCAGTAACAATAAAAGTGGTTTTGATAGCCTTGTTGAGGCAGCTACGGTGGCTTCACAGAAATTTAGTCCTATTCAACAGCAAGAAGTTGTTCTAGATGCACTTGACAGAGCCTTTCCAAAGCCAATACTTTCAGTTATAAGGAGAGTAATGCCACCATCTAAAATAGCAAGGGAATATTTTGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTACTCGGTCCCTCCGAGGTGAGAGAATCAGAAGTCAATGGCAGAAGAGAAAAAAATGTTGTCCACATAAAAAAATGCAGATTCTTAGAAGAAACAAATTGTGTTGGGATGTGTACTAATCTATGCAAAATGCCATCTCAATTGTTCATCAAGGACTCATTTGGTATGCCAGTCAACATGGTCCCAAATTTTGATGACATGAGTTGTGAGATGATATTTGGCCAGGAACCCCCATCATCAACTGATGATCCAGCATTCAAGCAACCCTGCTATAAACTTTGCAAGGCAAAGAAAAACCATGTAACGAAATGTCTTAGTTAA 762 0.378 MDAKMMIAHNMSLTPTLAQWRKLRFEPKRTFVVGVLARPTNDISDETLRKTNVYKDNWFDKLAINHLSKSVQAATGVSNNKSGFDSLVEAATVASQKFSPIQQQEVVLDALDRAFPKPILSVIRRVMPPSKIAREYFAVFTTLFFAWLLGPSEVRESEVNGRREKNVVHIKKCRFLEETNCVGMCTNLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPSSTDDPAFKQPCYKLCKAKKNHVTKCLS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2402 253 PANTHER BETA-CAROTENE ISOMERASE D27 26 249 IPR038938 -
Mal1g2402 253 Pfam Beta-carotene isomerase D27-like, C-terminal 147 228 IPR025114 GO:0005506
Mal1g2402 253 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 26 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2402 Mal-Chr1 32343231 32347309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2402 K17911 - gmx:100782912 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2402 1 32343231 32347309 Mal1g2402 1 32343231 32347309 ECH
Mal3g3794 3 115608599 115613182 Mal1g2402 1 32343231 32347309 PCT