Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3698 ATGAATTTTATCAAATCCGTTTTCTCCGACGACCCGGACCCACCAGGATCCGGATCCAACACCGCTTCTTCCAGCGACTCTTCAAACGCGCCGTTCAATCCCACCGCCGCGTGGAGGAACCTCGGCGATCTAATCAAAACCTTCGGCGAAAAATCTGAATCCGTCATCGAAATTTACCGTCGCGATCTTCACGAATTCGGCACAGGTTTGAAGAAGGAGATAGAAGTCGCACACGACTCTCTCGAAACGGTTGGACACGTCATCGATCAATTTGGAAACACCGTGATTAAAGGAACGGCTCAGATCATATCTCATGGCAAAGACGCAATCCTCCTCGATGATTCGAGGATGAAGAAGATTAAGAAACAGAGTAGTTTGAATTCGAAATTGTATAGTAGATTTGATGCTCAAATTCGTGCAATTCAGGGTGATTCTGATACTTATACAGAAGAACCTTTTGATTTGGAGCGTTATAGTAAGTGGAAATTGGAATTTTCGTTGGAAGGGAAAAAGGATGAAATGGAAGGGTTGTTAAGAGAGAATGATGAAATGGAGAGTGTTTATAAAAGGGTGGTTCCTAACGTTGTTGATAGTGAAACTTTTTGGTTGAGGTATTATTATAAGGTTTATAAGGTTAAGAAAGCTGAGGATGTGAGGGCGAAGCTTGTGAAGCGAATGTCGAGGGAAGAGGAGGAAGAGTTGAGTTGGGATGTTGAAGATGAGGAGTATGTGAGTTATGATGATGAGAAGAAGAAGAAGAAGGGAAAAGAGGGTGCATTTGATGATAATGATGTGGAAGAGGTGCATGATTCGAGTGGGGAGGAATCTAAGGTTGAAAAGATGATGGAGGAATCAAAAGTTGATGCGAATTTGCAGGTTGTTCAAGAGAAGGGGGATGGAAATAAAGTGGATAATGCCAAGGATTCTGCAGCTGGGTCTGATAAGAAAGTGACGATGGAGGGGAATGTTGGCGATGGAAAGTCTATACCGGTAGTAAGTCGGGACTTGGAGCGTGAGGAGGAGGAGAAAGAGCTTGACTGGGATAAGATTGTGGATCTTGGTAGCATTGATGAAAAGAAGGCAATTGGGGGGAGTGGTAGTCCAAGCAAAATTGATTTGCGGAAACGCTTGAGTTCTGCGGCAGAAGAAGAAGATTTGAGTTGGGATATTGAAGATGATGATGAGGAACCTGCTAAGGCTTGA 1203 0.4372 MNFIKSVFSDDPDPPGSGSNTASSSDSSNAPFNPTAAWRNLGDLIKTFGEKSESVIEIYRRDLHEFGTGLKKEIEVAHDSLETVGHVIDQFGNTVIKGTAQIISHGKDAILLDDSRMKKIKKQSSLNSKLYSRFDAQIRAIQGDSDTYTEEPFDLERYSKWKLEFSLEGKKDEMEGLLRENDEMESVYKRVVPNVVDSETFWLRYYYKVYKVKKAEDVRAKLVKRMSREEEEELSWDVEDEEYVSYDDEKKKKKGKEGAFDDNDVEEVHDSSGEESKVEKMMEESKVDANLQVVQEKGDGNKVDNAKDSAAGSDKKVTMEGNVGDGKSIPVVSRDLEREEEEKELDWDKIVDLGSIDEKKAIGGSGSPSKIDLRKRLSSAAEEEDLSWDIEDDDEEPAKA* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3698 400 ProSiteProfiles BSD domain profile. 161 213 IPR005607 -
Mal3g3698 400 SMART wurzfinal6 161 213 IPR005607 -
Mal3g3698 400 PANTHER PROTEIN, PUTATIVE-RELATED 76 394 - -
Mal3g3698 400 PANTHER SYNAPSE-ASSOCIATED PROTEIN 76 394 - -
Mal3g3698 400 MobiDBLite consensus disorder prediction 356 400 - -
Mal3g3698 400 MobiDBLite consensus disorder prediction 247 286 - -
Mal3g3698 400 Gene3D BSD domain 122 224 IPR035925 -
Mal3g3698 400 Coils Coil 167 187 - -
Mal3g3698 400 MobiDBLite consensus disorder prediction 300 314 - -
Mal3g3698 400 MobiDBLite consensus disorder prediction 13 31 - -
Mal3g3698 400 Coils Coil 212 232 - -
Mal3g3698 400 MobiDBLite consensus disorder prediction 247 344 - -
Mal3g3698 400 MobiDBLite consensus disorder prediction 1 31 - -
Mal3g3698 400 Pfam BSD domain 161 217 IPR005607 -
Mal3g3698 400 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 76 - -
Mal3g3698 400 SUPERFAMILY BSD domain-like 130 218 IPR035925 -
Mal3g3698 400 PANTHER PROTEIN, PUTATIVE-RELATED 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3698 Mal-Chr3 114441084 114442286 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3698 - - mtr:MTR_7g094240 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3698 3 114441084 114442286 Mal3g3698 3 114441084 114442286 ECH
Mal3g3698 3 114441084 114442286 Mal1g1810 1 23694071 23695495 PCT