LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g1810	ATGAATTTCTTCAAATCCGTTTTCTCCGACGAACCAGATCCACCTCAACCCGAATCCGAACCCAAACTCAACAATGCAGACCCGGATCCCAATTCCGGCACCGACGACGCTTGGAACTTCGGCGGACTCATCAAAACCCTCGCATCCAAATCCGAATCCATAATCGAAACCTACCGTCGCGATCTACAAGAATTCAGCACCGGCTTAAAAAACGAGATCGAGGTTGCTCAAGATTCCGTTGGCGAGATCGGAAGCACCGTCATCAAAGGAACCGCTCAGATCATATCTCAAGGTAAGGAAGCCATCCTCGCCGTTAATCTCGATTCCGATTCTGATAATGGTGCCAACGTTGCGAATCGCGATTCAAATCGATTGGATTCGAAGCGGTATAGTAGATTTGATTCTCAGGTTCGTGCAATTCAGGGTGATGTTGGGACTTATACTGAGGTGCCTGAGGATTTGAGTGAATTTGATGAGTGGAAATTAGGGTTTGTGTTGGAGGGGAAAAGTGATGAAATGGAGAGGCTTTTTAAGGAGAATGATGCAATGGAGAGTGTTTATAAGAGGGTTGTTCCGAATGTTGTTAATCATGAAAGTTTTTGGTATAGGTATTATTATAAGGTTTATAGGTTGAAGAAAGCTGAAGATGTTAGGGCTAGGCTTGTTAGAAGAATATCTAGGGAAGAAGAGGATTTGAGTTGGGATGTTGAAGATGATGATGATGACGACGAAGGTGTGGAGGAGAATGAAGGTGAAGTTAAACCAAAGCTTGTAATCAATAAGGAAATTGATGGTGAAAATTTGGCAAAAGGGGTAGATACTGATTTGAAAATTGGCGCCTCGAGCTCGGGTGCTAGTGTTGAGGAGGGAACAAAGAGATTGAGTGTGGGAGAGGTGCAGCATTCAGGCGAAGAGGAGTTGAAAGTAGAAAGGAAAGACAATTTAATGCAAAGCAATGAACTTGGTGATGAGAAGGTTAAGTCTGTTGAAGAATCACAAGTTGTTGAGAAAGCTGAACAAGTTGTTCGTGAGATTGGTGGTGGAAGTGAGAAAGCGAATGAGGATCGTGCTGTTGATAAAGCATCAAAGTTGAAAGTGGATGATGCTGTGAACGAGGATGATTCTGCGGGTGAGTCTGATGAGAAAGTTATAATGGAAAGGAAGGCTGGTGATGAAAAATCTTCTAGTAAGAATAATGAGTCGTCAGTGGTTGAAAGTCGGAAGATGGAAAATGAGGAGGAAGAGGATCTTGGGTGGGATGATATTGAGGATCTTAGCAGTATTGATGATAAGAAAGCAACTCAGAGTCAGAGTGATAGCACCAGCAAGGTTGATTTGCTGAAGCGCCTTAGTACTGCAGAGGAAGAAGAAGACTTGAGTTGGGACATCGAAGAAGATGATGATGATGAGCCTACCAAGGCTTGA	1425	0.4344	MNFFKSVFSDEPDPPQPESEPKLNNADPDPNSGTDDAWNFGGLIKTLASKSESIIETYRRDLQEFSTGLKNEIEVAQDSVGEIGSTVIKGTAQIISQGKEAILAVNLDSDSDNGANVANRDSNRLDSKRYSRFDSQVRAIQGDVGTYTEVPEDLSEFDEWKLGFVLEGKSDEMERLFKENDAMESVYKRVVPNVVNHESFWYRYYYKVYRLKKAEDVRARLVRRISREEEDLSWDVEDDDDDDEGVEENEGEVKPKLVINKEIDGENLAKGVDTDLKIGASSSGASVEEGTKRLSVGEVQHSGEEELKVERKDNLMQSNELGDEKVKSVEESQVVEKAEQVVREIGGGSEKANEDRAVDKASKLKVDDAVNEDDSAGESDEKVIMERKAGDEKSSSKNNESSVVESRKMENEEEEDLGWDDIEDLSSIDDKKATQSQSDSTSKVDLLKRLSTAEEEEDLSWDIEEDDDDEPTKA*	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	281	474	-	-
	Mal1g1810	474	PANTHER	SYNAPSE-ASSOCIATED PROTEIN	78	467	-	-
	Mal1g1810	474	Gene3D	BSD domain	122	222	IPR035925	-
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	234	248	-	-
	Mal1g1810	474	PANTHER	PROTEIN, PUTATIVE-RELATED	78	467	-	-
	Mal1g1810	474	Coils	Coil	211	231	-	-
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	1	38	-	-
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	348	395	-	-
	Mal1g1810	474	SMART	wurzfinal6	160	212	IPR005607	-
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	234	257	-	-
	Mal1g1810	474	Pfam	BSD domain	160	216	IPR005607	-
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	431	447	-	-
	Mal1g1810	474	SUPERFAMILY	BSD domain-like	130	217	IPR035925	-
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	457	474	-	-
	Mal1g1810	474	PANTHER	PROTEIN, PUTATIVE-RELATED	1	77	-	-
	Mal1g1810	474	MobiDBLite	consensus disorder prediction	294	338	-	-
	Mal1g1810	474	ProSiteProfiles	BSD domain profile.	160	212	IPR005607	-
	Mal1g1810	474	PANTHER	SYNAPSE-ASSOCIATED PROTEIN	1	77	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g1810	Mal-Chr1	23694071	23695495	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g1810	-		-	gmx:100792113	447.588

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g1810	1	23694071	23695495	Mal1g1810	1	23694071	23695495	ECH
	Mal3g3698	3	114441084	114442286	Mal1g1810	1	23694071	23695495	PCT