Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3543 ATGACTATCACACCTAACATCTCCGTTAACGATGGAAACTTGGTTGTCCATGGCAAGACCATACTCAAAGGAGTCCCAGAAAACGTTGTGCTTACTCCTGGTTCTGGCAATGGTCTTGTTACTGGTGCATTCATTGGTGCTACTGCTTCTCATACCAAAAGCCTCCATGTTTTTCCCATTGGTATCCTAGAGGGGCTCCGGTTCATGTGTTGCTTCCGGTTCAAGTTATGGTGGATGACACAGAGAATGGGAACTTGTGGAAAGGATATTCCTCTAGAGACTCAATTCATGCTAATAGAGAGCAAAGACAGTGAAGAGGAAGGGGAAAATTCTCCCATCATCTACACTGTCTTGCTTCCTCTATTGGAAGGTCCATTCCGATCTGTTCTACAAGGCAATGAGAAAAGCGAGATTGAGATTTGCTTCGAGAGTGGTGATCATGCTGTTGAGACTAATCAAGGCCTTCACATGGTTTACATGCATGCTGGCACCAACCCTTTTGAAGTCATCAACCAAGCTGTCAAGGCTGTGGAAAAGCACATGCAAACATTTCATCATCGTGAGAAGAAAAGACTGCCATCTTTTCTTGACTTGTTTGGTTGGTGCACATGGGATGCTTTCTATACTGATGTAACAGCTGAAGGTGTTGAGCAAGGCCTGAAAAGTCTATCAGAGGGAGGTACACCTCCGCGGTTCCTCATCATAGATGATGGCTGGCAACAGATTGAGAGTAAAGCAAAGGATCCTGACTGTGTTGTACAAGAAGGAGCACAGTTTGCTACTATGTTGACAGGGATTAAAGAGAATGCTAAATTTCAAAAGAATAAGAACGGAGAGCACAATGAACCGACATCAGGTCTTAAACATCTTGTTGACGGAGTGAAGAAACATCACAATGTCAAGAATGTTTATGTATGGCATGCACTAGCTGGTTATTGGGGCGGAGTGAAGCCAGCAGCGACTGGCATGGAACATTACGACACGGCCTTGGCATATCCGGTGCAGTCACCTGGAGTACTTGGAAACCAACCCGACATTGTCATGGACAGCTTGGCTGTACATGGCCTTGGTCTAGTACATCCAAAGAAGGTTTTCAACTTCTACGATGAGCTCCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTGAAGGTAGATGTGCAAAACATTATTGAAACCCTTGGCGCTGGACATGGTGGCCGAGTCTCACTTACTCGCAGCTATCATCACGCACTCGAGGCTTCCATTGCTCGTAACTTTTCAGACAATGGATGCATCGCGTGTATGTGTCACAACACTGATGGACTTTATAGTGCTAAGCAGACTGCTGTTGTGCGAGCCTCCGATGATTTTTACCCGCGTGATCCTGCTTCTCACACCATCCATATTTCATCTGTTGCATACAATTCACTTTTCCTTGGAGAGTTTATGCAACCAGATTGGGACATGTTCCATAGTTTACATCCAGCAGCAGAATATCATGCCGCGGCTCGTGCAATCGGTGGATGTCCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTTGACCTTCTTAAGAAACTGGTTCTTCGTGATGGTTCGGTTCTCCGTGCTCAATTACCTGGAAGGCCTACACGCGACTCGCTCTTTGTTGATCCAGCAAGAGATAGGACTAGCTTGCTAAAAATATGGAACATGAACAAATGTTCTGGGGTGGTTGGTGTATTTAACTGCCAAGGTGCTGGGTGGTGCAAGGTAGAGAAGAAGACTCGCATCCACGATACATCTCCTGGTACACTCACTAGTTCTGTTTGTGCCAATGATGTCGATCTCATCAACCAAGTAGCTGGTGCTGAATGGCATGGGGAGGCTATTGTTTATGCTTATAGATCAGGCGAAGTGATTCGGCTAGCAAAAGGGGTTTCGATTCCAGTGACACTAAAGGTTCTGGAGTTTGAACTTTTCCATTTCTGTCCAATCCAAGAAATATCGCCAAGTATATCAGTTGCAGCAATAGGCCTGATGGACATGTTCAACACTGGAGGAGCTGTGGAAGAGGTTGAAATCCATAAAGCCTCTGACAACAAACAAGAACTATTTGATGGCGAGGTTGTATCGGAACTGACAACTTCTCTCAGTCCTAACCGAACGACAACTGCAACTATTGCTCTGAAGGTCAGAGGAAGTGGCAAGTTTGGAGTTTACTCCTCACAGCGTCCGCTGAAGTGCGCGGTAGACGGCGTTGAAACCAACTTCAACTATGACTCAGAAAATGGGTTGATAACCTTCTACATCCCAGTTCCTCAGGAGGAGATGTATAAATGGTTGATAGAAATCCAAGTTTAA 2328 0.4532 MTITPNISVNDGNLVVHGKTILKGVPENVVLTPGSGNGLVTGAFIGATASHTKSLHVFPIGILEGLRFMCCFRFKLWWMTQRMGTCGKDIPLETQFMLIESKDSEEEGENSPIIYTVLLPLLEGPFRSVLQGNEKSEIEICFESGDHAVETNQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFHHREKKRLPSFLDLFGWCTWDAFYTDVTAEGVEQGLKSLSEGGTPPRFLIIDDGWQQIESKAKDPDCVVQEGAQFATMLTGIKENAKFQKNKNGEHNEPTSGLKHLVDGVKKHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYDELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIARNFSDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHNFDLLKKLVLRDGSVLRAQLPGRPTRDSLFVDPARDRTSLLKIWNMNKCSGVVGVFNCQGAGWCKVEKKTRIHDTSPGTLTSSVCANDVDLINQVAGAEWHGEAIVYAYRSGEVIRLAKGVSIPVTLKVLEFELFHFCPIQEISPSISVAAIGLMDMFNTGGAVEEVEIHKASDNKQELFDGEVVSELTTSLSPNRTTTATIALKVRGSGKFGVYSSQRPLKCAVDGVETNFNYDSENGLITFYIPVPQEEMYKWLIEIQV* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3543 775 Pfam Raffinose synthase or seed imbibition protein Sip1 7 758 IPR008811 -
Mal3g3543 775 Gene3D Aldolase class I 197 523 IPR013785 -
Mal3g3543 775 PANTHER - 1 775 IPR008811 -
Mal3g3543 775 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 775 - -
Mal3g3543 775 SUPERFAMILY (Trans)glycosidases 195 530 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3543 Mal-Chr3 112567313 112571627 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3543 1 550 Glycoside Hydrolase AT3G57520 82.940 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3543 K06617 - gmx:100807861 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3543 3 112567313 112571627 Mal3g3543 3 112567313 112571627 ECH
Mal3g3543 3 112567313 112571627 Mal1g3789 1 75057389 75063736 PCT