Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3789 ATGCTAAGGACACCAACATTAGTAGCTTCAGAACAATACTCCACAGGGTGGATAAGGATTCCTCCTTCATATTCATGGGTGCCACCAATTCGGAATCATTCTAATTCCCGCATAACCTTTAGTATCCATCATCATCATCATTATAAGTCCCTAGTAGTGAAGTGTTCAAATATGACGGTGACACCTAAGATTTCAGTTAACGATGGGAATTTGGTGGTTCATGGGAAGACCATACTAAGTGGAGTTCCAGAGAATATTGTGGTAACTCCAGGAATTGTGACTGGTGCTTTTATTGGTGCAACTGCTTCCAACACTAAAAGCCTCCATGTCTTTCCCATTGGTGTCTTCCAGGATCTCCGATTCTTGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACACATAGAGTGGGAAATTGTGGTAGGGATATCCCTCTGGAGACCCAGTTCTTGCTTATAGAGATCAAGGAAAGTCAAAACCAACAGGAAAATTCTCCAGTCATCTACGCTGTCTTGCTTCCTCTATTAGAAGGCCAGTTCCGCGCAGTCCTACAAGGAAATGACAAAAATGAGATAGAGGTTTGCCTTGAGAGTGGAGATCCTACTGTTGAGACCAATCAAGGCCTTCACATGGTCTACATGCATGCTGGAACCAACCCCTTTGAAGTGATCAACCAAGCTGTCAAGGCTGTTGAAAAACATATGGAAACTTTCCTTCACCGTGAGAAGAAAAGATTGCCATCTTTTCTTGACTGGTTTGGATGGTGTACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTATTGAGGAAGGCTTGAAAAGCCTATCGGAGGGAGGTGCATCTCCACGGTTTCTCATCATCGATGATGGTTGGCAACAGATCGAGAGTAAACCAAAAGATGCTGATTGTGCTGTACAAGAGGGAGCACAGTTTTCTACTAGGTTAACTGGTATTAAGGAAAACACTAAATTTCAAAAGAATGGAGAGAGCAATGGCTTGAAGCATGTTGTGGATCAAACAAAGCAACGTCACAGTGTGAAGTACGTTTATGTTTGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAATTGGAATGGAACATTACGACACTTCCTTGGCATACCCGATGCATTCTCCAGGCATCCTAGGAAACCAACCAGACGTCGTCATGGACAGCTTGACTGTCCATGGCTTAGGCCTGGTTCATCCGAAGAAGGTTTTTGATTTCTACAATGAGCTCCATGCTTACTTAGCTTCGTGTGGAGTAGATGGAGTGAAAGTTGATGTGCAAAACATTATTGAGACCCTTGGTTCAGGACATGGCGGCAGAGTCTCAATCACACGTAGCTATCATCAGGCGCTTGAGGCTTCTATTGCTCGAAATTTTCGCGACAATGGATGCATTGCCTGCATGTGCCATAATACTGATGGACTTTACAGTGCCAAGCAGACTGCTGTTGTGAGAGCCTCTGATGACTTTTACCCACATGATCCTGCTTCTCACACCATTCATGTTTCTTCTGTTGCTTATAACTCGATTTTCCTTGGAGAATTCATGCAACCTGACTGGGACATGTTTCATAGTTTACATCCGGCGGCCGAGTATCATGCTGCAGCTCGGGCAATAAGTGGAGGTCCAATTTACGTCAGTGATAAACCAGGAACGCATAATTTCGATCTTCTAAGGAAACTAGTTCTTCCTGATGGCTCAGTTCTCCGGGCTCAGTTACCTGCTCGGCCCACTCTTGACTCTCTCTTTGTTGATCCAGCAAGAGATGGAACTAGCTTGCTTAAGATATGGAATTTGAACAAATGTTGTGGAGTGGTTGGTGTATTTAACTGTCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAGAACCGTATTCATTGTGAGACCCCTGGGACACTTGGTGGCTCTGTTTGTACTTTTGATGTTGACCTCATTGCTCAAGTTGCTGGTGCTGATTGGAATGGGGATGCTATTGTCTATGCTTACAGATCAGGCGGCGTAATTCGGCTACCAAAAGGAGCTTCAGTGCCAGTGACACTAAAAGTATTAGAGTATGAGCTTCTCCATTTCTATCCAATCAAGGAAATCGCGCAAGGTATTTCATTTGCACCAATAGGGCTATTGGATATGTTCAACAGTGGAGGAGCTGTGGAACAGTTTGAAATCCACAAAGGATGTGAAGTTCTTGATGGAGGGTCCAGTTCTAGCAGTTCTGGAAAAGCAGTAACAGCATCTGTTAGCCTAAGAGTTAGGGGAAGTGGAAGATTTGGGTTTTACTCTTCCAAGAAGCCAGTGAAGTGCGTCGTGGGTGACGATGAAACCGACTTCAACTATGAGTCGGAGACTGGGTTGACAACTTTCTACATCCCACTTTCAGTGGAGGACATGTACAAATGGCCAATAGAGATACAATTTTGA 2442 0.4451 MLRTPTLVASEQYSTGWIRIPPSYSWVPPIRNHSNSRITFSIHHHHHYKSLVVKCSNMTVTPKISVNDGNLVVHGKTILSGVPENIVVTPGIVTGAFIGATASNTKSLHVFPIGVFQDLRFLCCFRFKLWWMTHRVGNCGRDIPLETQFLLIEIKESQNQQENSPVIYAVLLPLLEGQFRAVLQGNDKNEIEVCLESGDPTVETNQGLHMVYMHAGTNPFEVINQAVKAVEKHMETFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGIEEGLKSLSEGGASPRFLIIDDGWQQIESKPKDADCAVQEGAQFSTRLTGIKENTKFQKNGESNGLKHVVDQTKQRHSVKYVYVWHALAGYWGGVKPAAIGMEHYDTSLAYPMHSPGILGNQPDVVMDSLTVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSITRSYHQALEASIARNFRDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPHDPASHTIHVSSVAYNSIFLGEFMQPDWDMFHSLHPAAEYHAAARAISGGPIYVSDKPGTHNFDLLRKLVLPDGSVLRAQLPARPTLDSLFVDPARDGTSLLKIWNLNKCCGVVGVFNCQGAGWCKIEKKNRIHCETPGTLGGSVCTFDVDLIAQVAGADWNGDAIVYAYRSGGVIRLPKGASVPVTLKVLEYELLHFYPIKEIAQGISFAPIGLLDMFNSGGAVEQFEIHKGCEVLDGGSSSSSSGKAVTASVSLRVRGSGRFGFYSSKKPVKCVVGDDETDFNYESETGLTTFYIPLSVEDMYKWPIEIQF* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3789 813 Gene3D Aldolase class I 250 568 IPR013785 -
Mal1g3789 813 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 58 812 - -
Mal1g3789 813 Pfam Raffinose synthase or seed imbibition protein Sip1 64 796 IPR008811 -
Mal1g3789 813 PANTHER - 58 812 IPR008811 -
Mal1g3789 813 SUPERFAMILY (Trans)glycosidases 248 570 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3789 Mal-Chr1 75057389 75063736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3789 58 605 Glycoside Hydrolase AT3G57520 76.481 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3789 K06617 - gmx:100807861 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3789 1 75057389 75063736 Mal1g3789 1 75057389 75063736 ECH
Mal3g3543 3 112567313 112571627 Mal1g3789 1 75057389 75063736 PCT