Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2773 ATGTCTTTGGAAAATAAGAATCACCAACTTTTGTCAAAGATTGCTACCAATGATAAACATGGTGAAAATTCTCCTTATTTTGATGGGTGGAAGGCTTATGAATCAAACCCATTTCACCCCACAGAAAATCCTCAGGGTGTTATCCAGATGGGCCTTGCAGAAAATCAGCTCTGTTTTGATCTGATTGAAGAGTGGATAAGGAATAATCCAAAAGCCTCAATTTGCACTCCAGAAGGAGTGAATGAATTCAGACATATTGCAAACTTTCAAGACTATCATGGATTGCCAGAATTCAGAAATGCTGTGGCAAATTTTATGTCAAAAGTGAGAGGTGGTAGGGTAAGATTTGATCCTGACCGTATATTGATGAGTGGAGGAGCAACAGGAGCCAATGAATTAATCATGTTCTGTTTGGCTGATCCTGGTGATGCTTTTTTGGTTCCTAGCCCTTATTATCCAGCATTTGTTCGTGATTTGTGTTGGAGAACCGGTGTGCAACTAATTCCTGTCCAATGTCATAGCTCAAACAATTTCAAGATAACAAGAGAAGCACTTGAAGAAGCTTATAAAAAAGCACAAGAAGAAAACATCAATGTGAAAGGGTTAATCATAACAAATCCATCAAACCCTTTAGGGACAACATTAGAAAAGGAAACACTAAAGAGCATAGTGAGTTTCATCAATGAAAATAACATCCATTTAGTGTGTGATGAAATTTATTCAGGAACAGTTTTCGACACTCCGAAATTCGTAAGTGTCTCTGAAGTTATACAAGAAATGGAAGAATGCAAAAAGGATCTCATTCATATTATCTATAGTTTATCCAAAGACATGGGTCTTCCAGGTTTCAGGGTCGGTTTAGTTTATTCGTACAACGATGAAGTTGTGAACTGCGGTAGAAAAATGTCGAGTTTTGGATTAGTCTCATCGCAGACACAACATTTTCTAGCCGCAATGCTTTCGGATGATACATTCGTGGACACATTTTTGGCAGAAAGTTCAAGAAGATTAAGAGAGCGACGTGAATTTTTTACAAAGGGACTTGAGAAAGTTAACATTACTTGCTTACCAAGTAATGCAGGGCTATTCTTTTGGATGAATTTGAGGAGTTTGTTGAAAGAGAAAACATTTGAAGGTGAAATGAAGCTATGGCGTTTGATCATCAATGAGGTGAAGCTTAATGTTTCGCCGGGTTCGGCTTTCAATTGCTCTGAGCCAGGTTGGTATAGAGTTTGTTTTGCTAACATGGATCATGAAACTGTTGAAATTGCATTGATGAGAATCAGAGCATTTGTTAATGGAAGAGAAAAGGGGAAAACAGTTGAAATCAAACGTTGGAACAGTAATCTTAGACTTAGCTTTTCTTCAAGAAGGTTTGAAGAGAATGTTATGTCTCCTCATAGGATGTCTCCTCATTCACCAATGCCTCATTCACCACTTGTTCGAGCTACTTAA 1455 0.3787 MSLENKNHQLLSKIATNDKHGENSPYFDGWKAYESNPFHPTENPQGVIQMGLAENQLCFDLIEEWIRNNPKASICTPEGVNEFRHIANFQDYHGLPEFRNAVANFMSKVRGGRVRFDPDRILMSGGATGANELIMFCLADPGDAFLVPSPYYPAFVRDLCWRTGVQLIPVQCHSSNNFKITREALEEAYKKAQEENINVKGLIITNPSNPLGTTLEKETLKSIVSFINENNIHLVCDEIYSGTVFDTPKFVSVSEVIQEMEECKKDLIHIIYSLSKDMGLPGFRVGLVYSYNDEVVNCGRKMSSFGLVSSQTQHFLAAMLSDDTFVDTFLAESSRRLRERREFFTKGLEKVNITCLPSNAGLFFWMNLRSLLKEKTFEGEMKLWRLIINEVKLNVSPGSAFNCSEPGWYRVCFANMDHETVEIALMRIRAFVNGREKGKTVEIKRWNSNLRLSFSSRRFEENVMSPHRMSPHSPMPHSPLVRAT* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2773 484 Coils Coil 175 202 - -
Mal3g2773 484 MobiDBLite consensus disorder prediction 465 484 - -
Mal3g2773 484 Gene3D Aspartate Aminotransferase, domain 1 36 427 IPR015422 GO:0003824
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 142 163 - -
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 120 140 - -
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 232 255 - -
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 267 291 - -
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 50 76 - -
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 196 220 - -
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 299 322 - -
Mal3g2773 484 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 83 99 - -
Mal3g2773 484 CDD AAT_like 88 430 - -
Mal3g2773 484 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 447 - -
Mal3g2773 484 SUPERFAMILY PLP-dependent transferases 16 432 IPR015424 -
Mal3g2773 484 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 6 447 - -
Mal3g2773 484 Pfam Aminotransferase class I and II 48 428 IPR004839 GO:0009058|GO:0030170
Mal3g2773 484 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 273 286 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mal3g2773 484 Gene3D - 70 322 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2773 Mal-Chr3 101445542 101448988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2773 K20772 - gmx:100775969 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2773 3 101445542 101448988 Mal3g2773 3 101445542 101448988 ECH
Mal3g2773 3 101445542 101448988 Mal5g1279 5 22389272 22392807 PCT