Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2709 ATGTCGGAACTGGACATGTCAGTTATTAAACCCGAGATGATGAAGCCCTATATTTGGCTTCAGACTTCGGATGGTTCAATCCAACAGGTAGAACAAGAAATTGCAATGTTTTGCCCTCTTATTTGTCAAGAAATAATACAAAAAGGCACGGGATCTTCCAAAAATTGTGCGATATGTCTTCCTGAAAAAGTCACTCCTGCTATGTTGAGCTTAGTTCTTGATTATTGTCGTTTTCATCAAGTACCAGGCCGCTCAAACAAGGAACGGAAGTCTCACGATGAAAAATTCATCAAGATGGATACCAAACGGCTCTGTGACTTGACATCAGCAGCAGACAGCCTTCAATTGAGGCCTCTGGTTGATCTTACAAGTCGTACACTTGCACGAATAATTGAAGGAAAATCTCCCGAGGAGATACGGGAGATATTTCATTTGCCGGATGATCTCACAGAGGAAGAGAAGTTAGAGCCTCTGAAAAACACAACTGATGACCCAAGGATAAGGCTTTTGAACCGGTTGTATGCGAAAAAAAGGAAAGAGCTTAAAGAGCGTGGGAGGTTAAAGAATGTTGAATTAGAAGAAGAGCATGTAGATGAGCGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGCAGATCCAAAAGTGTCTAAAACTTCTAAGAATAAAAAGAAGAATAGAAGAAAAAAAGAGCAGAAGAAGAGCTCTTCTTTGACGGAAGCTTCCGAACTGCAAAAGAAGGTTACTGAATTGAGTGGTCATAGTACTGTATCTGATAAAATTGCTGGGACCTCAGATATGCATACAGAAGATGACACTTTCGCTCATAAAGAGTTTGATGATGATGACGAAATAGATGATGAGATCGATCCGGCGCTACAGGAAAAAATTGACAGGGAAGTAGAAGATTTTGCCCGCCGATTAAATTCTGACTGGCCAGAAAGGATGCAAGAATTTTTATCATCAGGGCAAGAAAGGACGTCAATGCTTTTTGCTACCAACGGGAATGGTTTTCTAAGGAGAAATACTTGTACGCTTTTCTATCTGTTTGCAGTTATTTTACTTATCTGTGATACATGTGCTTGCTGA 1095 0.3991 MSELDMSVIKPEMMKPYIWLQTSDGSIQQVEQEIAMFCPLICQEIIQKGTGSSKNCAICLPEKVTPAMLSLVLDYCRFHQVPGRSNKERKSHDEKFIKMDTKRLCDLTSAADSLQLRPLVDLTSRTLARIIEGKSPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERGRLKNVELEEEHVDERSVDDLLSFINGNDADPKVSKTSKNKKKNRRKKEQKKSSSLTEASELQKKVTELSGHSTVSDKIAGTSDMHTEDDTFAHKEFDDDDEIDDEIDPALQEKIDREVEDFARRLNSDWPERMQEFLSSGQERTSMLFATNGNGFLRRNTCTLFYLFAVILLICDTCAC* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2709 364 SUPERFAMILY POZ domain 16 80 IPR011333 -
Mal3g2709 364 MobiDBLite consensus disorder prediction 240 265 - -
Mal3g2709 364 PANTHER SKP1 1 267 IPR016897 GO:0006511
Mal3g2709 364 MobiDBLite consensus disorder prediction 208 272 - -
Mal3g2709 364 SUPERFAMILY Skp1 dimerisation domain-like 91 160 IPR036296 GO:0006511
Mal3g2709 364 PANTHER SKP1-LIKE PROTEIN 20 1 267 - -
Mal3g2709 364 Pfam Skp1 family, dimerisation domain 118 154 IPR016072 GO:0006511
Mal3g2709 364 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
Mal3g2709 364 Pfam Skp1 family, tetramerisation domain 17 80 IPR016073 GO:0006511
Mal3g2709 364 SMART skp1_3 15 116 IPR001232 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2709 Mal-Chr3 100435835 100439914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2709 - - gmx:100809439 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2709 3 100435835 100439914 Mal3g2709 3 100435835 100439914 ECH
Mal5g1351 5 24111759 24115749 Mal3g2709 3 100435835 100439914 ECH
Mal3g2709 3 100435835 100439914 Mal5g1351 5 24111759 24115749 PCT