Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2598 ATGGGTTTGTTTTCTGGGATATTTCTGGGGGTATTATTCGGCGTTGCATTGATGGCTGGATGGGAGAGAATGATGAGGTATAGAAGCCGCAAGAGAATTGCAAAGGCGGTTGACATTAAACTCCTTGGATCCCTTAATAGAGACGATTTAAAGAAACTTTGTGGTGAAAGTTTACCTGAATGGATATCTTTCCCTGTATATGAGCAGGTGAAATGGCTAAACAAGCTGCTGTCCAAATTGTGGCCATTTGTGGCAGATGCAGCAACTATGGTGATAAGAGAATCTGTTGAACCACTATTAGAAGAGTATAGACCTCCTGGAATTACTTCGTTGAAGTTCAGTAAGCTGTCCCTTGGAACTGTCGCTCCAAAAATTGAAGGTATTCGTGTTCAGAGTCTTAAAAAAGGTCAAATCATAATGGACATTGATTTCCGTTGGGGTGGTGATCCCAATATTGTTTTGGCTGTTGAAGCTGCACTTGTTGCGTCAATTCCTATTCAGTTGAAGGATCTCCAGGTTTTCACCATTATCCGTGTTATATTCCAACTCGCTGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAGCCTAGAATTGATTACACTCTGAAGGCAGTTGGTGGAAGTTTGACGGCACTTCCCGGAATTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACCGATATGCTCCAATGGCCTCATCGGATTGTTGTTCCACTTGGTGGTATTCCTGTGGATACTAGTGATCTGGAGCTTAAACCCCAGGGATTGCTTAAAGTGACTGTAATGAAAGCAAATGATTTAAAGAATATGGAAATGATTGGGAAGTCTGATCCTTACGTAGTTGTGTATGTTCGACCATTGTTTAAAGTCAAAACAAAGGTTATTGATAACAACTTGAATCCAATTTGGAATGAGGAATTCGACTTGATTGCAGAAGACAAAGAGACCCAGTCACTCACTCTCGAGGTTTTTGATAAAGACATTGGGCAAGATAAGCGATTGGGAATAGCAAAATTGCCACTTATTAACCTGGAAGCAGAAACTGAAAAGGAAATCGAAGTGAGGCTTCTATCATCGCTTGATACACTGAAAGTAAAAGATAAGAAGGATCGAGGAACCTTGAGAATAAAGTATTTCTATCATGAATTTAACAAGGAAGAACAGCTGGCTGCACTAGAAGCAGAGAAAATGACTCTAGAACAAAGGAAGAAACTGAAAGAGGAAGGAGTTATAGGAAGTACAATGGACGCGCTAGACGGAGCAGCATCAGTAGTTGGGTCTGGTGTTGGAGTGGTTGGTTCTGGTGTTACTGCTGGTGCTGGACTTGTAGGAAGTGGAATTGGTGCTGGAGCTGGAATGGTGGGAAGTGGAATCGGTGCTGGAGCTGGAATTGTTGGCAGTGGGCTCGGCGCCGTTGGCAGTGGACTGAGCAGGGCAGGGAAGTTTATGGGCAGGACAATCACAGGGCAATCTACAACCAGAAGGAGTGCCAGTGGTTCATCTACTCCTGTCTTTAATGTGGAGGAAAATGGGGTTGGTGCAAAGCCGCGGTAA 1581 0.4326 MGLFSGIFLGVLFGVALMAGWERMMRYRSRKRIAKAVDIKLLGSLNRDDLKKLCGESLPEWISFPVYEQVKWLNKLLSKLWPFVADAATMVIRESVEPLLEEYRPPGITSLKFSKLSLGTVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPNIVLAVEAALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVNSIVTDMLQWPHRIVVPLGGIPVDTSDLELKPQGLLKVTVMKANDLKNMEMIGKSDPYVVVYVRPLFKVKTKVIDNNLNPIWNEEFDLIAEDKETQSLTLEVFDKDIGQDKRLGIAKLPLINLEAETEKEIEVRLLSSLDTLKVKDKKDRGTLRIKYFYHEFNKEEQLAALEAEKMTLEQRKKLKEEGVIGSTMDALDGAASVVGSGVGVVGSGVTAGAGLVGSGIGAGAGMVGSGIGAGAGIVGSGLGAVGSGLSRAGKFMGRTITGQSTTRRSASGSSTPVFNVEENGVGAKPR* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2598 526 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Mal3g2598 526 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Mal3g2598 526 PRINTS C2 domain signature 328 336 IPR000008 -
Mal3g2598 526 PRINTS C2 domain signature 281 293 IPR000008 -
Mal3g2598 526 PRINTS C2 domain signature 306 319 IPR000008 -
Mal3g2598 526 MobiDBLite consensus disorder prediction 496 526 - -
Mal3g2598 526 CDD C2 266 366 - -
Mal3g2598 526 MobiDBLite consensus disorder prediction 496 516 - -
Mal3g2598 526 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 264 391 IPR035892 -
Mal3g2598 526 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 521 IPR045050 GO:0008289
Mal3g2598 526 Gene3D C2 domain 259 418 IPR035892 -
Mal3g2598 526 SMART C2_3c 265 362 IPR000008 -
Mal3g2598 526 ProSiteProfiles C2 domain profile. 247 365 IPR000008 -
Mal3g2598 526 Pfam C2 domain 265 360 IPR000008 -
Mal3g2598 526 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 521 - -
Mal3g2598 526 Coils Coil 391 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2598 Mal-Chr3 98581877 98588506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2598 249 350 Lipid Metabolism Gene Families AT3G61300 33.010 8.69e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2598 - - mtr:MTR_7g075790 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2598 3 98581877 98588506 Mal3g2598 3 98581877 98588506 ECH
Mal3g2598 3 98581877 98588506 Mal5g1607 5 31398418 31408840 PCT