Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2499 ATGATGAAGTATGCGGGATTCGAGCATGTTCTTAGATATTTTGATGAAGATGGTGATGGAAAGGTTTCACCAGCAGAGCTAAGACAGAGGCTAAGAGTAATGGGAGAAGAGATTTTGTTGAAAGAAGCTGAAATGGCTATTGAAGCAATGGATTCAGATGGTGATGGTTATTTGAGTTTGGAGGATCTAATTGCTTTGATGGATGAAGGTGGAAAGGAACAAAAGTTGAAGGATTTGAGAGAAGCATTTGAGATGTATAATGATAGTGAGAAGTGTGGTTTTATAACACCAAAGAGTTTGAAGAGGATGCTTAAGAAGATGGGTGAGTCTAAGTCTATTGATGAATGTAAAGCTATGATTAAACATTTTGATTTAAATGGGGATGGTTTGCTTAGCTTTGATGAATTCACAATAATGATGCAATGA 426 0.3638 MMKYAGFEHVLRYFDEDGDGKVSPAELRQRLRVMGEEILLKEAEMAIEAMDSDGDGYLSLEDLIALMDEGGKEQKLKDLREAFEMYNDSEKCGFITPKSLKRMLKKMGESKSIDECKAMIKHFDLNGDGLLSFDEFTIMMQ* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2499 141 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
Mal2g2499 141 Gene3D - 3 70 - -
Mal2g2499 141 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Mal2g2499 141 ProSitePatterns EF-hand calcium-binding domain. 15 27 IPR018247 -
Mal2g2499 141 Gene3D - 71 141 - -
Mal2g2499 141 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
Mal2g2499 141 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 3 141 - -
Mal2g2499 141 CDD EFh 7 67 IPR002048 GO:0005509
Mal2g2499 141 ProSiteProfiles EF-hand calcium-binding domain profile. 111 141 IPR002048 GO:0005509
Mal2g2499 141 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 3 141 - -
Mal2g2499 141 SUPERFAMILY EF-hand 7 140 IPR011992 -
Mal2g2499 141 Pfam EF-hand domain pair 77 141 IPR002048 GO:0005509
Mal2g2499 141 Pfam EF-hand domain pair 11 67 IPR002048 GO:0005509
Mal2g2499 141 CDD EFh 78 141 IPR002048 GO:0005509
Mal2g2499 141 ProSiteProfiles EF-hand calcium-binding domain profile. 74 110 IPR002048 GO:0005509
Mal2g2499 141 SMART efh_1 78 107 IPR002048 GO:0005509
Mal2g2499 141 SMART efh_1 115 141 IPR002048 GO:0005509
Mal2g2499 141 SMART efh_1 6 34 IPR002048 GO:0005509
Mal2g2499 141 SMART efh_1 42 70 IPR002048 GO:0005509
Mal2g2499 141 ProSitePatterns EF-hand calcium-binding domain. 124 136 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2499 Mal-Chr2 31673747 31674172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2499 3 141 EF-hand Containing Proteins AT1G76640 46.154 2.11e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2499 K13448 - gmx:100779557 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3988 5 109581450 109581872 Mal2g2499 2 31673747 31674172 ECH
Mal2g2499 2 31673747 31674172 Mal2g2499 2 31673747 31674172 ECH