Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0914 ATGTCTTTCTTGTCTACTCTCCGTCGATCCTCCTTATTCATCCAAAGATTCCGAACTTCGACTCCACAATCTTCTTCCTCTGCACCATCATTACCAAATACCAACCCACCGCAATATCCAAAGTTGGTTTCGGCCTTTGTTGCTGGCTCTGCTCTTCTTACTCTTCTGTATTACTTCACCAATACGAATTCACACTTCGACTCTGCTTTAAACAATGCCTTAAGAAAATTATCTCTTTCTGAGGGTTCCAATAATAACTTACTTTTTGGAGATTCCTACAGAAGTAAGGTTTTCTTCAACTATGAGAAGCGCATACGGTTGCATAGTTCACCAGAGAAGGTTTTTGAATACTTTGCATCATGCCGTACACCAGAAGGAGAGGTTCTTATGAATCCAGCAGATTTAATGCGTGCAGTTGTTCCTGTTTTCCCTCCATCTGAATCTAACCTTGTTAGAGATGGATCCTTGAAAGGAGAAAGAAGTCCTGGTCACTTGTTCTGTCCTCCTTCAGAATTTTTTATGCTTTTCGATGTAAATGGTGACGGTCTTATATCTTTCAAAGAGTATTTATTCTTGGTAACGCTGCTTAGCATCCCAGAATCAAGCTTTTCTGCAGTATTTAAAATGTTTGACATGGATAATGATGGGGAGATAGATAAAGAAGAATTCAAAAGAGTGGTGACTTCAATGCGATCTCATAGCAAGCATGGTGTCCACCGAAAGAATGAACAACAGACGGATGCTTCTGTAGAAAATGGAAGGATGGTGGAATACTTATTTGGTAAAGATGGAAAAGGACGCCTCAGACATGATAAATTTGTGAAGTTCATAAGAGATTTGCATGATGAAATTTTGAGGCTGGAGTTTGTTCATTATGACTTCAAATCTCAAAAAACAATATCAGCTACGGATTTTGCACACTCCATAGTTGCTTCAGCAGACGTGAGTCATCTGAGCAAATTACTTAAAAGGGTTGATGAGTTGAACAATGATCCACAGTTCAATAATGTACGCATCACATTTGAGGAGTTCAAGAATTTTGCAGAACTGAGGAAAAAATTAGTACCACTTTCATTGGCTCTATTCAGTTTTGCAAAAGTAAATGGCCTTTTAACAAGAGATGATTTTCAACGAGCTGCATCAAGTGTTTGTGGTTTATCTCTCTCTGATAACGTGGTTGAGATTGTTTTCCATTTGTTTGACACAAGTGGGGATGGAAATCTAAGTTCAAATGAGTTTGTTAGAGTGCTACACAGGCGTGAGAGAGATGTTGGTCGATCTGTGGAGACAGGAATCATGGGTTTCTTGTCATGCTGTTGGAACTGTACGGACACTTCCCCAAGTTCACAATTGTTTTCCTGA 1362 0.3928 MSFLSTLRRSSLFIQRFRTSTPQSSSSAPSLPNTNPPQYPKLVSAFVAGSALLTLLYYFTNTNSHFDSALNNALRKLSLSEGSNNNLLFGDSYRSKVFFNYEKRIRLHSSPEKVFEYFASCRTPEGEVLMNPADLMRAVVPVFPPSESNLVRDGSLKGERSPGHLFCPPSEFFMLFDVNGDGLISFKEYLFLVTLLSIPESSFSAVFKMFDMDNDGEIDKEEFKRVVTSMRSHSKHGVHRKNEQQTDASVENGRMVEYLFGKDGKGRLRHDKFVKFIRDLHDEILRLEFVHYDFKSQKTISATDFAHSIVASADVSHLSKLLKRVDELNNDPQFNNVRITFEEFKNFAELRKKLVPLSLALFSFAKVNGLLTRDDFQRAASSVCGLSLSDNVVEIVFHLFDTSGDGNLSSNEFVRVLHRRERDVGRSVETGIMGFLSCCWNCTDTSPSSQLFS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0914 453 Gene3D - 112 253 - -
Mal2g0914 453 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Mal2g0914 453 CDD EFh 171 228 IPR002048 GO:0005509
Mal2g0914 453 PANTHER CALCIUM-BINDING EF HAND PROTEIN 1 453 - -
Mal2g0914 453 Pfam EF hand 172 189 IPR002048 GO:0005509
Mal2g0914 453 Pfam EF hand 205 227 IPR002048 GO:0005509
Mal2g0914 453 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 453 IPR039800 GO:0005509|GO:0006851
Mal2g0914 453 CDD EFh_MICU 203 420 - -
Mal2g0914 453 Gene3D - 254 357 - -
Mal2g0914 453 ProSiteProfiles EF-hand calcium-binding domain profile. 198 233 IPR002048 GO:0005509
Mal2g0914 453 Pfam EF-hand domain pair 369 419 IPR002048 GO:0005509
Mal2g0914 453 SUPERFAMILY EF-hand 171 279 IPR011992 -
Mal2g0914 453 Gene3D - 366 429 - -
Mal2g0914 453 ProSitePatterns EF-hand calcium-binding domain. 211 223 IPR018247 -
Mal2g0914 453 SUPERFAMILY EF-hand 285 419 IPR011992 -
Mal2g0914 453 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Mal2g0914 453 SMART efh_1 392 420 IPR002048 GO:0005509
Mal2g0914 453 SMART efh_1 168 196 IPR002048 GO:0005509
Mal2g0914 453 SMART efh_1 202 230 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0914 Mal-Chr2 10568583 10571094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0914 76 385 EF-hand Containing Proteins AT4G32060 64.331 1.87e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0914 K22827 - gmx:100786375 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5560 1 131034051 131038679 Mal2g0914 2 10568583 10571094 PCT