Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0899 ATGAGTGAGATGATTGCATCTAACGAGAGCCCTCGCCGATCTCTGAGCATTCAACTTTCTTCCTTGATGATCGTTGATGGCAGTTTTTCATCCTACGACAAACTTCCTTCCCAAAATCTCACCCTCACCATCCTCAAATTGGATTCCACATCCTTCCAGATTGAAGTTGCAAACACAGCAACTGTTGCAGCACTCAAGCAGGCAGTGGAAGCGGCTTTTAGCCACAAACCGGAGAAAATATCGTGGCCACTTGTTTGGGGGCAATTTTGTTTATGCTATGAAGGACAGAAGTTAGTTACAGAAACGGATTATCTTAGAGATTACGGTATCAAAGATGGTGATCAGCTTCGTTTCATTCACCATGTATCCAACGTCTGTAATTTTCAAAGAAAACCGAAGAAGCGAATTGTCAATTCCAAACAACACGGGAGGTCATCGTCGCAAGTGAATAGATGTCAACAGACAGAAAATGGTGATGAAGACAATGTTGGTTTAAATAATATAGTCATAGAGAATGGCAGGATTCAGGATTGCAATGCAGAAGAAAATCGCCTTGGAGTAAGCAGCAGGTTAACTGGATATTTGGGAGGGATGTTCTCTGAGGCCAGGATGGCAGTTGTGAGAAAAGCTAGATTGGAAGGTGGGATTTCCAAAGGTATAGCGAGCAGTTTTAAGAAGGTTAAAGGGATTGTAGGCCATTGCAGAAAGCCACATCGAAAACACACATGGACAGAATCTCCAGGTTGA 747 0.4297 MSEMIASNESPRRSLSIQLSSLMIVDGSFSSYDKLPSQNLTLTILKLDSTSFQIEVANTATVAALKQAVEAAFSHKPEKISWPLVWGQFCLCYEGQKLVTETDYLRDYGIKDGDQLRFIHHVSNVCNFQRKPKKRIVNSKQHGRSSSQVNRCQQTENGDEDNVGLNNIVIENGRIQDCNAEENRLGVSSRLTGYLGGMFSEARMAVVRKARLEGGISKGIASSFKKVKGIVGHCRKPHRKHTWTESPG* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0899 248 SMART ubq_7 40 124 IPR000626 GO:0005515
Mal2g0899 248 MobiDBLite consensus disorder prediction 141 159 - -
Mal2g0899 248 CDD Ubl_SNRNP25 40 121 IPR040610 -
Mal2g0899 248 ProSiteProfiles Ubiquitin domain profile. 40 119 IPR000626 GO:0005515
Mal2g0899 248 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 6 241 - -
Mal2g0899 248 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 6 241 IPR039690 GO:0000398|GO:0005689
Mal2g0899 248 SUPERFAMILY Ubiquitin-like 35 123 IPR029071 -
Mal2g0899 248 MobiDBLite consensus disorder prediction 136 159 - -
Mal2g0899 248 Pfam Ubiquitin-like domain 40 122 IPR040610 -
Mal2g0899 248 Gene3D - 35 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0899 Mal-Chr2 10410811 10413316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0899 - - mtr:MTR_3g106830 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0899 2 10410811 10413316 Mal2g0899 2 10410811 10413316 ECH
Mal2g0899 2 10410811 10413316 Mal1g5536 1 130526599 130530259 ECH
Mal1g5536 1 130526599 130530259 Mal2g0899 2 10410811 10413316 PCT