Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5536 ATGGCGGAAACTACTCTATCGTTGATAATTCCGAACGCGAAGAGGAAAACAACGCAATTTTCATCTCCTTCTCCACTTTCTATTTTTTCTACCAAGAGTTTGTTCTACGATAGGCTTCCTTCAGAACCGTTAAGACTCTCTGTTCTCAAATTAGACGGAACTTCTTTTGATATTCAGGTTTCCAAGAGTGCGACTATTGCGGAGCTTAAGGATGCTGTTGAAGGTGTTTTTAGTTACATGCCTCAGCATGGTCCAGGCAAAATTTCATGGCCACATGTTTGGGGGCAGTTTTGCTTATGTTATGATGGACAGAAGCTAGTTACAGAAGATGATTATCTTAAAAATTATGGTGTCAAGGATGGTGACCAGCTCCATTTCATCCGCCATGCATCAAACAACTGCGGTGCTCGAAGAAAGCGGTCAAAGAAAAGAGTTTTCCATTTGAAACAATACAGGAGGTCGTCGCAAACGAATTACTGCAAACAGAAAGAAAACCGCGATGCTGATGACGACGACGATGATGATGACATTGGTTCTGATGAGGAAGCCTTAGAGAATGCAGAGACCAAGCACCACATTGAAGCATTGCATGTTAGAAAGAACAAGATCACTGGCTTTGTGGGAGAGCTGTTATCATACACACCACTGGCAGTTGTGAGAAAAACTAGTGCTCAAAACAGGATCTTCCCGTCGACAACAATTTCCAGGTGTTTGATTGGTGGTCTTAGAAAGATCAAAAGGATTGTATGTTTGGGCAGGAGGCAGCAGTATTCTACATGGAAACAGTACTAA 792 0.423 MAETTLSLIIPNAKRKTTQFSSPSPLSIFSTKSLFYDRLPSEPLRLSVLKLDGTSFDIQVSKSATIAELKDAVEGVFSYMPQHGPGKISWPHVWGQFCLCYDGQKLVTEDDYLKNYGVKDGDQLHFIRHASNNCGARRKRSKKRVFHLKQYRRSSQTNYCKQKENRDADDDDDDDDIGSDEEALENAETKHHIEALHVRKNKITGFVGELLSYTPLAVVRKTSAQNRIFPSTTISRCLIGGLRKIKRIVCLGRRQQYSTWKQY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5536 263 Gene3D - 39 137 - -
Mal1g5536 263 Pfam Ubiquitin-like domain 44 129 IPR040610 -
Mal1g5536 263 MobiDBLite consensus disorder prediction 155 179 - -
Mal1g5536 263 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 2 259 IPR039690 GO:0000398|GO:0005689
Mal1g5536 263 SUPERFAMILY Ubiquitin-like 39 135 IPR029071 -
Mal1g5536 263 CDD Ubl_SNRNP25 44 129 IPR040610 -
Mal1g5536 263 ProSiteProfiles Ubiquitin domain profile. 44 133 IPR000626 GO:0005515
Mal1g5536 263 PANTHER - 2 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5536 Mal-Chr1 130526599 130530259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5536 - - gmx:100819176 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5536 1 130526599 130530259 Mal1g5536 1 130526599 130530259 ECH
Mal2g0899 2 10410811 10413316 Mal1g5536 1 130526599 130530259 ECH
Mal1g5536 1 130526599 130530259 Mal2g0899 2 10410811 10413316 PCT