Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0881 ATGTCTAAAGTTCTCAGCTTTACTGGAAGTGATGATTTTTGTACTGGGAGGTCGATGTACCTTAATCCGAAGGAGGAAGGTCTCTTCTTGTCTCTTGGCTGTCAAGAATATGCTTACAAACCTCTTCAAAAGAGATCTCGCGTCAATGTTCCATTTGATTTCAGTGGAGAAAGATGGTTTGAGCAGAAGCCAGAGACATCTATTGAAACATTACCCGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGAAGGACAAGATAGGAGTTTATGTGCTTCTGTATCCAAGCGCTGGCTTACGCTTCTAAGCAATATTTCCAAGAATGAAATCTGCAACAAAGCAAGTTCCGGAAACGGAAACAAGGATGGTGATGAACAAGAAGAATTTGGTGATGAAGGTCATCTTTCTCGAAGCTTGGAGGGAAAGAAGGCAACAGATGTTAGACTAGCTGCCATTGCTGTTGGGACTGCATCTCGAGGAGGATTAGGGAAGCTGTCAATTCATGGAAGCAATCCAGATCGTGCGTTAACTGATGTTGGTCTCAAGGCAGTTGCTCATGGCTGCCCTTCTCTAAAGTCTTTCACTCTTTGGGATGTTTCTACCATTAGTGACGAAGGCTTGATCAAGATTGCTAATGGTTGTCATCAGATAGAGAAGCTTGATCTATGCAAGTTACCAACAATTTCTGACAAGGCTTTGATTGCAGTTGCAAAGCACGGCCAGAATCTGACTGATTTATCGATAGAGTCATGTCATAATATTGGTGGTGAAGGTCTACGAGTTATTGGGAAGTTGTGTCCAAATCTAAGGTCTGTATCAATCAAAAACTGTGCTGGAGTTCGTGATCAGGGAATTGCTGGCCTTTTATGCTCCACATCCTTTGTTCTAACAAAGTTGACACTTGAATTACTAGCTGTTTCTGATTACTCACTGGCAGTTATTGGACAGTATGGCTTTGCAGTTACCGATCTTGTCCTAAATTTCCTCCCAAATGTCACAGAGAAAGGATTCTGGGTGATGGGTAATGGCCATGCACTGCAAAAACTAATGTCGCTCACAATTGGGTCGTGCCCTGGAGTAACAGATATTGGGCTTGAAGCTATTGGAAAGGGCTGTCCGAATGTGAAAAACTTTCAGTTTCGTAGGTGTGCATTTTTGTCAGACAACGGGCTGGTATCCTTCACCAAGGCGGCTCCGTCAATTGAGAGCCTACAATTGGAAGAGTGCCACAGGATTACTCAATTCGGGCTTGCTGGCGTCCTTTTTAACTGCAGTGCAAAATTGAAGGCTCTTACTCTGGTAAGCTGCTATGGGATCAAAGATCTGAATCTGAATTTGCCAGCAGTACCTCGTGAGTCAATTTCGACATTATCAATCCGTAACTGCCCTGGAGTTGGTAATTGTACTCTCGCTATCCTTGGGAAGCTCTGTCCTCTGCTTATGCGTCTTGAATTGATTGGACTTGAGGGAATAACTGACACAGGGTTTCTTTCACTGCTTCAGAGGTCTAAGGCCAGTTTGGCTAATGTTAATCTAAGTGGTTGCATTAATCTGACAGATGCAGGAGTTTTGTTCATGGTCAAGCTGCATTGTTCGACTCTTGGAGTGCTAAACCTTAATGGTTGTAAAAAGATCGGTGATGCTAGCTTGACAGCAATTGCAGGCAATTGCCTGGCGCTGAGTGATCTTGATGTTTCCGGGTGTGCAATCACCGATGCAGGGATTGCTGCCCTTCCTCGTGGAGTCCTGCTCAATCTAGAGGTACTTTCTTTGGCAGGTTGCTCATTGGTTTCAAACAAGAGCTTGCACGCTTTGAAAAGTTTGGACGATTCCCTCGAGGGATTGAATATAAAAAACTGCAAGTCGATTAGCAGCCGCACGGTTGACAAGCTTGTGAAACATCTCTGGATGTGTGACGTCCTCTTCTGA 1932 0.4415 MSKVLSFTGSDDFCTGRSMYLNPKEEGLFLSLGCQEYAYKPLQKRSRVNVPFDFSGERWFEQKPETSIETLPDECLFEILRRLPEGQDRSLCASVSKRWLTLLSNISKNEICNKASSGNGNKDGDEQEEFGDEGHLSRSLEGKKATDVRLAAIAVGTASRGGLGKLSIHGSNPDRALTDVGLKAVAHGCPSLKSFTLWDVSTISDEGLIKIANGCHQIEKLDLCKLPTISDKALIAVAKHGQNLTDLSIESCHNIGGEGLRVIGKLCPNLRSVSIKNCAGVRDQGIAGLLCSTSFVLTKLTLELLAVSDYSLAVIGQYGFAVTDLVLNFLPNVTEKGFWVMGNGHALQKLMSLTIGSCPGVTDIGLEAIGKGCPNVKNFQFRRCAFLSDNGLVSFTKAAPSIESLQLEECHRITQFGLAGVLFNCSAKLKALTLVSCYGIKDLNLNLPAVPRESISTLSIRNCPGVGNCTLAILGKLCPLLMRLELIGLEGITDTGFLSLLQRSKASLANVNLSGCINLTDAGVLFMVKLHCSTLGVLNLNGCKKIGDASLTAIAGNCLALSDLDVSGCAITDAGIAALPRGVLLNLEVLSLAGCSLVSNKSLHALKSLDDSLEGLNIKNCKSISSRTVDKLVKHLWMCDVLF* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0881 643 SUPERFAMILY RNI-like 176 418 - -
Mal2g0881 643 MobiDBLite consensus disorder prediction 114 141 - -
Mal2g0881 643 SMART fbox_2 71 112 IPR001810 GO:0005515
Mal2g0881 643 SMART LRR_CC_2 505 530 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 612 635 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 558 582 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 478 503 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 452 477 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 215 240 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 189 214 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 241 266 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 373 398 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 399 424 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 584 609 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 267 292 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 347 372 IPR006553 -
Mal2g0881 643 SMART LRR_CC_2 532 557 IPR006553 -
Mal2g0881 643 MobiDBLite consensus disorder prediction 121 141 - -
Mal2g0881 643 Gene3D Ribonuclease Inhibitor 452 641 IPR032675 -
Mal2g0881 643 Gene3D Ribonuclease Inhibitor 293 451 IPR032675 -
Mal2g0881 643 Gene3D Ribonuclease Inhibitor 61 292 IPR032675 -
Mal2g0881 643 PANTHER UNCHARACTERIZED 16 634 - -
Mal2g0881 643 Pfam Leucine Rich repeat 242 263 IPR001611 GO:0005515
Mal2g0881 643 Pfam Leucine Rich repeat 561 579 IPR001611 GO:0005515
Mal2g0881 643 Pfam Leucine Rich repeat 531 555 IPR001611 GO:0005515
Mal2g0881 643 SUPERFAMILY F-box domain 57 104 IPR036047 GO:0005515
Mal2g0881 643 Pfam F-box-like 68 103 IPR001810 GO:0005515
Mal2g0881 643 SUPERFAMILY RNI-like 346 640 - -
Mal2g0881 643 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 16 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0881 Mal-Chr2 10199425 10202017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0881 K14515 - gmx:100805418 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0881 2 10199425 10202017 Mal2g0881 2 10199425 10202017 ECH
Mal1g5528 1 130367435 130370105 Mal2g0881 2 10199425 10202017 PCT