Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0861 ATGAGCAGACCAGGAGATTGGAACTGCAGGACATGCAACCACCTCAACTTCCAGAGAAGGGAATCTTGTCAACGATGCGGAGAATCAAGATCAACTTCTTCTGGCGGTGATTTCGGTGGCTCATTTCTTGGTGGAAGAGGCTCTAGTTCGCCTTTTCCTTTCACAACCGGCCCTGATGTCCGCCCCGGTGATTGGTATTGCACTCTTGGAAACTGTGGAGCTCACAACTTTGCCAGCCGCTCCAGCTGCTTCAAATGTGGTGCCCCTAAGGATATTAATATTGACACCTTCTCCTCCTCTGACTCCTCCTCAGACATCCCAAGACTACTCAGATCACCCTACGGTTTCGGCGGAGGAGTTAGTGGTGGCGGCGGCGCCTCCACTCGCCCTGCTGGCTGGAAATCCGGTGACTGGATTTGCACCAGGTCCGGGTGTAACGAGCATAACTTCGCCAATAGAATGGAATGCTACCGATGCAATGGGCCAAGGGACTCTAGTACCGGAAGGTCCTCCTATTTATCGTGA 525 0.5276 MSRPGDWNCRTCNHLNFQRRESCQRCGESRSTSSGGDFGGSFLGGRGSSSPFPFTTGPDVRPGDWYCTLGNCGAHNFASRSSCFKCGAPKDINIDTFSSSDSSSDIPRLLRSPYGFGGGVSGGGGASTRPAGWKSGDWICTRSGCNEHNFANRMECYRCNGPRDSSTGRSSYLS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0861 174 Pfam Zn-finger in Ran binding protein and others 61 90 IPR001876 -
Mal2g0861 174 Pfam Zn-finger in Ran binding protein and others 134 163 IPR001876 -
Mal2g0861 174 Pfam Zn-finger in Ran binding protein and others 3 27 IPR001876 -
Mal2g0861 174 SUPERFAMILY Ran binding protein zinc finger-like 126 166 IPR036443 -
Mal2g0861 174 ProSiteProfiles Zinc finger RanBP2 type profile. 61 92 IPR001876 -
Mal2g0861 174 SUPERFAMILY Ran binding protein zinc finger-like 57 92 IPR036443 -
Mal2g0861 174 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Mal2g0861 174 ProSitePatterns Zinc finger RanBP2-type signature. 65 86 IPR001876 -
Mal2g0861 174 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Mal2g0861 174 SMART zf_4 5 29 IPR001876 -
Mal2g0861 174 SMART zf_4 63 89 IPR001876 -
Mal2g0861 174 SMART zf_4 136 162 IPR001876 -
Mal2g0861 174 ProSiteProfiles Zinc finger RanBP2 type profile. 134 165 IPR001876 -
Mal2g0861 174 Gene3D - 2 33 - -
Mal2g0861 174 Gene3D - 126 165 - -
Mal2g0861 174 Gene3D - 57 92 - -
Mal2g0861 174 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 168 - -
Mal2g0861 174 PANTHER ZINC FINGER PROTEIN 1 168 - -
Mal2g0861 174 ProSitePatterns Zinc finger RanBP2-type signature. 138 159 IPR001876 -
Mal2g0861 174 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0861 Mal-Chr2 9980172 9980924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0861 - - mtr:MTR_3g107610 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0861 2 9980172 9980924 Mal2g0861 2 9980172 9980924 ECH
Mal5g4484 5 116895000 116896187 Mal2g0861 2 9980172 9980924 ECH