Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0788 ATGATAAATGATGGGGCTAGGTTATACTTGTATCATAGTGATAGAATGAGTAGACCGACAACCCGGAGTAAAAATAAAAGACAAAAACAGGGTGATGATGGTGTCTATACTAATGAAATATGGAGGAAAATTCACGATACCGGTGTGGTTACTGAAGATGATGTTAATCATCTGTATATGATTTGGAAACCGGTTTGTTCAGGCTGCCGTGTTAATACCAAAGATAACCCAAATTGCTTTTGTGGATTAGTTCCAACTCCAAATGGATCTAGGAAGTCTGGCTTATGGGAGAAGATGTCAGATTTTGTTGTAAGTCTTGGCCCTGATCCAAACAACGATCTTCGTGCTTCTGCAGATTCTCCTGCAGGTCTAACAAATCTTGGGGCAACATGTTACGCCAATGGAATATTGCAATGCTTGTACATGAACAAATTGTTCCGAGAAGGCATATTTTCTGCAGAACCAGATGTTTTAAGGCAACAACCGGTGTTAGATCAACTAGCTCGACTTTTTGCGCAGTTGCAAGCTAGTAAAATGTCTTTCATAGATTCTTCTCCCTTCGTGAAAACACTCGAGTTAGATAATGGAGTTCAGCAGGATAGTCATGAATTTTTGACATTGCTTCTGTCATTGCTCGAGCGCTGTCTGAGTCATTCCAAAGTTCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGCGGAAGTGTGTCTCATGTGACAACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAACGGAAGATTTTTATGAGTTGGAGTTGAATGTGAAGGGATTGAAAAGTTTAGATGAGAGCCTAGATGATTACCTAGCTGTTGAAGAGCTTCATGGAGACAATCAATATTTTTGTGATTCATGCAACGCAAGAGTTGATGCCACTCGCAGCATCAAGCTGTGTACATTACCTGATGTACTTAATTTTCAACTTAAACGTTGTGTCTTTCTTCCAAAGACTACTACAAAGAAGAAAATTACATCTTCATTTTCATTTCCTGTACAACTTGATATGCGGCATAGACTGTCTGAGTTGTCTCAGTTTGATTTGGTATATGACTTGTCAGCTGTATTGATTCACAAGGGAACCGGTGTTAATAGTGGCCATTACATTGCTCACATCAAGGACAAAAACACGGGGCAGTGGTGGGAATTTGATGATGAACATGTTACTAATTTGGGTAACCGTCCATTTGGCGGAGGATCCTCTAGTTCTACCAAGTCTATTTCAACTGATGCAATTCACTCTGACTGCTCTGAAGCAAGGATAGCTGAAAGTAATGGAAACGGCTTCGACGCCACCCATTCAAAATCTTCGCTTATGGAGACATTTTCTTCTTGTGATGCATACATGTTGATGTACCATCTTAAACATACAAAAAGTATAAGTGAAAATGGGGGTATAGATTGCGGTGCTAACCATAAAGAAATAGAGGGTGTTGTAGCTACTGCACAAGATGATGCTTCTCTTCCTTCTCATCTTTATGATGAAATTTGCAATTTCAACGCCTCATATCTTGATGCTTGTCAACAATATAGTCATAGGAAAGAGTTAGAATTGAGTCGTATTACTGATAGGAGACAGGAAGTTCGATCTATTTTAGCTGAAGCTACTGTTCCACCATTGGAGCGACCATTTTATTGGATTTCTAGTGACTGGCTTCGCCAGTGGGCTGACAACATTATTCCAACTTCTATCGACAACACATTCATCCAATGTTCACATGGGAAAGTCCCAGTTTCAAAGGTTCCCTCAATAAAGCGACTGTCTGCCAAAGCTTGGGATAAGTTGTTCTCCAAGTATGGTGGGATGCCAACACTATCTCATGACGACCATTGTCGGGATTGTCTGATACACGGGGCTCAGACAGTGGTATCAGCCGACACCTATCGGGGTAGAAGAGAATCATTGAAGTCACTTGCACGGGATATTCTTGATGGAAACTGTCCAGATGGAAAGTATTACATATCCAGACCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTCCTTGATGCTCCATCTGAAGCTGATGCTGGACTAACGGCAGCGATTAGTTGTTCGCACGGTCTATTGATGCCAGAGCAAGCTCCTGGTGCTAAGCGAGTGCTTATTCCTGAGACTTTTTGGCTCTTCTTATATGAAGATGCTATTTCTGTAAAACCTGATGATCCTTTAGGTGGCCCAGCTATTCCTTCAGATTCCATTGAGTGTTCCCAATGCAATATTGAATTTTCTCAAGCAGCATGCTTGGAGGACTCCTTGAGAATAGTTAAACAAAAGCAGCGTCAGAATCATGAGAAATTATTCCAGGCTAAAAGTATGCCACTCTCTGTGCATTGCAAATATTTCTTGGTGCCTTCTTCATGGATTTCAAAATGGAGAAATTACATTAGTCCACCATTCAAGAATCTAGATAAACCTGAAACTTTAGACGGGGTAATTGATTCGCTGATCTGTGAAAAGCACTCGCAACTTATTGAAAGACCTCCTCAACTGGTTTTCAGACGCGGCTCTATAATCCAGAGAGAATCTTCGGCAGGTGGCTTAACCATCATATCTGAGAATGATTGGATATGCTTCTGTGAAGAATGGGGTGGTACTGAGACCAAAGGTATATCTGCAACAATTGATCATATTAATGATTCAGATAACTTTTTGACTGGATCCAGTGGCGGGATGCTGATATGTGAGGATCAGTTACACACGGAGGATAAAATGAATAATGAAAATGGAACTGGACAAATTTTGATCAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGAATTGATGCATAAACTTAACTATTGCAACGAGGACATATGTGTAATTCTTGTACGTGGTAAGGAGGTACCTAAATCAATCATGGAGGCCTCAAAGGGATTAGTTGAAGCAGATCGCCGGGTTTCCAAGCGTTCCCGGAAGACTAAAAATGGAAGTTCAGTTAGTCTGAAAGTTTCTGCTTCAACATCACTATACCAGCTGAAGATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATTCTAAATAAAGGGGATAGGATAATTGATATTGATGATGAAAGTGCTACCCTTGCGGATGCAAATATATTTGCCAAAGATCAGATTATAGTGAGGGATTCTGAGATCCATGAAAATCGAGATATTGCGGATGAGCTCTGCTGTGATAAGATGGATATGCAGCATACTGAGGAAGGTTTTCGTGGAACACTTCTTACAGCCAACATTTCATCCCAGGTTGTTTAA 3294 0.408 MINDGARLYLYHSDRMSRPTTRSKNKRQKQGDDGVYTNEIWRKIHDTGVVTEDDVNHLYMIWKPVCSGCRVNTKDNPNCFCGLVPTPNGSRKSGLWEKMSDFVVSLGPDPNNDLRASADSPAGLTNLGATCYANGILQCLYMNKLFREGIFSAEPDVLRQQPVLDQLARLFAQLQASKMSFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKTEDFYELELNVKGLKSLDESLDDYLAVEELHGDNQYFCDSCNARVDATRSIKLCTLPDVLNFQLKRCVFLPKTTTKKKITSSFSFPVQLDMRHRLSELSQFDLVYDLSAVLIHKGTGVNSGHYIAHIKDKNTGQWWEFDDEHVTNLGNRPFGGGSSSSTKSISTDAIHSDCSEARIAESNGNGFDATHSKSSLMETFSSCDAYMLMYHLKHTKSISENGGIDCGANHKEIEGVVATAQDDASLPSHLYDEICNFNASYLDACQQYSHRKELELSRITDRRQEVRSILAEATVPPLERPFYWISSDWLRQWADNIIPTSIDNTFIQCSHGKVPVSKVPSIKRLSAKAWDKLFSKYGGMPTLSHDDHCRDCLIHGAQTVVSADTYRGRRESLKSLARDILDGNCPDGKYYISRPWLQQWWKRKVLDAPSEADAGLTAAISCSHGLLMPEQAPGAKRVLIPETFWLFLYEDAISVKPDDPLGGPAIPSDSIECSQCNIEFSQAACLEDSLRIVKQKQRQNHEKLFQAKSMPLSVHCKYFLVPSSWISKWRNYISPPFKNLDKPETLDGVIDSLICEKHSQLIERPPQLVFRRGSIIQRESSAGGLTIISENDWICFCEEWGGTETKGISATIDHINDSDNFLTGSSGGMLICEDQLHTEDKMNNENGTGQILIKTCPEVCESCIGEKESCELMHKLNYCNEDICVILVRGKEVPKSIMEASKGLVEADRRVSKRSRKTKNGSSVSLKVSASTSLYQLKMMIWESFGVVKENQILNKGDRIIDIDDESATLADANIFAKDQIIVRDSEIHENRDIADELCCDKMDMQHTEEGFRGTLLTANISSQVV* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0788 1097 Gene3D Cysteine proteinases 108 464 - -
Mal2g0788 1097 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 17 1067 - -
Mal2g0788 1097 CDD Ubl_USP48 987 1088 IPR044743 GO:0004197|GO:0004843|GO:0016579
Mal2g0788 1097 ProSiteProfiles DUSP domain profile. 763 883 IPR006615 GO:0004843
Mal2g0788 1097 ProSiteProfiles DUSP domain profile. 528 620 IPR006615 GO:0004843
Mal2g0788 1097 SUPERFAMILY Cysteine proteinases 121 464 IPR038765 -
Mal2g0788 1097 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 359 377 IPR018200 GO:0004843|GO:0006511
Mal2g0788 1097 SUPERFAMILY DUSP-like 534 620 IPR035927 -
Mal2g0788 1097 SMART dusp 546 622 IPR006615 GO:0004843
Mal2g0788 1097 ProSiteProfiles DUSP domain profile. 635 742 IPR006615 GO:0004843
Mal2g0788 1097 Pfam Ubiquitin carboxyl-terminal hydrolase 123 461 IPR001394 GO:0004843|GO:0016579
Mal2g0788 1097 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 17 1067 - -
Mal2g0788 1097 Gene3D - 987 1062 - -
Mal2g0788 1097 SUPERFAMILY Ubiquitin-like 988 1056 IPR029071 -
Mal2g0788 1097 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 122 464 IPR028889 -
Mal2g0788 1097 Gene3D - 759 879 IPR035927 -
Mal2g0788 1097 CDD Peptidase_C19L 123 461 IPR033841 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0788 Mal-Chr2 9076722 9087262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0788 120 400 Miscellaneous Gene Families AT4G31670 29.568 1.17e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0788 - - gmx:100815770 1847.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5433 1 128752316 128761020 Mal2g0788 2 9076722 9087262 PCT