Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5433 ATGAGCAGAACAACGACTCGGAGTAAAAATAAAAGACCGAGACAAGGGGATGATGATACCGGAACTTCTGAAATATTGAGGAAAATACACAAAACAGGTGTGGCAACTGATGAAGATATGAACAAACTGTATATGATTACGAAGCCAGTCTGTTTAGGTTGTCGTGTTAATACTAAAGACAACCCGAATTGCTTCTGTGCATTGGTTCCGCCTCCAAATGGGACCCGGAAGTCTGGCATATGGCAGAAGATATCTGATTTTGTTGACAGTCTTGGCTTTGACCCAAACTCGGAACTTCGTGAATCTGCTAATTCACCTGCAGGACTCACAAATCTTGGTGCAACGTGTTATGCTAATAGCATACTCCAATGCTTGTATATGAATAAACATTTCCGAGAAGGATTATTTTCTGTAGAACCAGATGTTTTACAGCAACAACCGGTGTTAGATCAACTGGCTCGACTTTTTGCTCAGTTGCAGTTAAGTAAAAAGGCTTTCATAGATTCTTCTCCATTTGTAAAAACGCTGGAGTTGGACAATGAAGTTCAGCAGGATAGCCATGAGTTCCTGACATTGCTTCTGTCATTGCTTGAGCGTTGTCTTAGCCGTTCCAAAATTTCCAAGGCAAGAACGATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACAACGTGCTCACAATGTGGTAGAGACTCTGAAGCTTCTTCCAAAATGGAAGACTTCTATGAGTTGGAGTTGAATGTCAAGGGTTTGAAAAGTTTAGATGAGAGCTTAGATGATTACCTCACTGTTGAAGAGCTTAATGGAGACAATCAATATTTTTGTGAGTCGTGTAAAACAAGAGTTGATGCTACTCGCAGCATCAAGCTGCGAACATTACCTGATGTGCTAAATTTTCAGCTTAAGCGCTATGTCTTCCTTCCAAAGACAACAACAAAGAAGAAAGTTACTTCTCCATTTTCATTTCCCTCTGAACTTAGTATGCACCACAGATTGTCTGAGCCATCTCAGTCTGAATTGATATATGACTTGTCAGCTGTTCTGATACACAAGGGAACTGCAGCTAATAGTGGTCATTACATTGCACACATCAAGGATGAAAACACGGGGCAATGGTGGGAATTTGATGATGAGCTTGTTACTAACTTGGGCCTTTGTCCATTTGCCGAAGAAGCTTCATGCTCTGCTTCTAAATCTGCTAAGAATGATTCTGCTTCTAAATCTGCTAAGAATGATGTAGATCATTCTAATTTGTCTGAAGCAAGGGTAGCTGACAGTAATGGAAATGGTTCAAATGTCAAAGTTTCACAATCTTCACTCATGGAGACATTTTCATCTAGTGATGCATATATGTTGATGTACCATCTTAAGCATACCAAAATTTTTAGTGAGAATGGGGGAATGGTTTCTAGTGCTAATCATACTGAATCAGTTGATGATCCAATTACTGCACAAGATAATGATTGTCTTCCTTCTCATTTTTGTGAAGAGATTCAAAATTTCAATGCCTCGTATCTTGATTCTTGCCAGCAGTACAACCATAGGAAAGAGGTAGAATTGAGTCGTATCAGTGAGAGGAGAGAAGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTCAACCACTGGAGCAATTATATTTTTGGATTTGTAGTGACTGGCTTCGGCAATGGGCTGAAAATGTTACTCCAAGTGCTATTGACAACACATCTATCCAATGTGCACATGGTAAAGTCCCAGTGTCAAAGGTTACCTCGACAAAGCGATTGTCTTCTAAAGCATGGGATAAATTATTGTCAAAGTATGGTGGGGGGCCAACACTTTCTCATGAGGACTGTTGTTTAGACTGTCTGATTGATGGGGCTCGGAATGTCGTGTCAGCTGACACTTATCGGGATCAAAGAGAATCATTTAAGCAACTTGCACGGGATATTCTTGATGGAAAAAACGAAGACGGAAAGTACTATGTGTCTAGATCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTTGCCGATGCTCCATCTGAAGCTGATTCTGGACCGACAGCAGCTATTAGTTGTCCACATGGACAACTTATGCCTGAGCAAGCAACTGGTGCTAAGCGGGTGCTTGTTCCTGAGGGTTTTTGGCTCTTCTTATATGAAGATGCCACTTCTGTGAAAAATGATGATCTTTTGGTCTGCCCTACGTTTCCTTTAGACTCCAAAGAGTGCTCTCAATGCAGTAGCGAATTATCTGAAGTGGTTTGCATGGAGGACTCTATGAGGTTATTAAAACAAAGGCAGCGTCAGAGTCATGAGAAGCTGTTCAGTGGGAAAAATATGCCACTCTCTCTAGATTGCACGTATTTTTTAGTTCCTTCCTCTTGGATTTCAAAATGGAGAAATTATATCAACCCAGCTTTCAAGAATTCTGACACACCTGAAACATTAAATGTGGTGATTGGTGCACTGCTCTGTGAAAAGCACTCTCGACTCATTGAAAGGCCTCCTGAACTGATTTTCAGACGTGGTGCTATAATTCCAAGGGAGTCTTCTGCAGGTGGCTTAACCATCATATCTGAGAATGATTGGAAATGTTTCTGTGAAGAATGGGGTGCTACTGAGACCCAAGGAGTATCTGCAAAGGTTGAGATTATTAATGATTCGGCAAACGCTATAGCTGGATCTTGTGAAGAGATGGCGATATGTGAGGACCAGTTGGCCAATTGGGATAAGGTGAATAATGAAAGTGGGAATGGTCAAGTTTTGTTCAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGAGTTAGTGCATAAACTTAATTATTCCAATGAGGATATATGTGTAATTCTTGTACGCGGAAAGGAGGTCCCTAGATCAATCTTGGAGGCTTCAAAGGGATTTGTTGAAACAGATCGAAGGGTTTCTAAACGCTCCAGGAGGACTAAAAATGGGAATTCAGTTAATCTAAAAGTGTCTGCTTCAACCTCAATTTACCAGCTGAAAATGATGATATGGGAAACCTTCGGGGTTGTCAAAGAAAACCAGATACTACAAAAAGGTGATATAACAATTGATAACAATGACGAAAATACTACACTTGTGGACGTTAACATATTTGCTGGCGATCAGATTATTGTGAGGGACTCTGAGATCCATGAAAATCGAGATATTGCTGATGAATTGTGTTACGAGAAAAAGGATACACAACATACTGAGGGAGGGTTTCGTGGAACACTTTTGACTTCAAATGTTTCATCTCAGGTTGTGTAG 3279 0.4068 MSRTTTRSKNKRPRQGDDDTGTSEILRKIHKTGVATDEDMNKLYMITKPVCLGCRVNTKDNPNCFCALVPPPNGTRKSGIWQKISDFVDSLGFDPNSELRESANSPAGLTNLGATCYANSILQCLYMNKHFREGLFSVEPDVLQQQPVLDQLARLFAQLQLSKKAFIDSSPFVKTLELDNEVQQDSHEFLTLLLSLLERCLSRSKISKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLTVEELNGDNQYFCESCKTRVDATRSIKLRTLPDVLNFQLKRYVFLPKTTTKKKVTSPFSFPSELSMHHRLSEPSQSELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDELVTNLGLCPFAEEASCSASKSAKNDSASKSAKNDVDHSNLSEARVADSNGNGSNVKVSQSSLMETFSSSDAYMLMYHLKHTKIFSENGGMVSSANHTESVDDPITAQDNDCLPSHFCEEIQNFNASYLDSCQQYNHRKEVELSRISERREEVRSVLAEAPVQPLEQLYFWICSDWLRQWAENVTPSAIDNTSIQCAHGKVPVSKVTSTKRLSSKAWDKLLSKYGGGPTLSHEDCCLDCLIDGARNVVSADTYRDQRESFKQLARDILDGKNEDGKYYVSRSWLQQWWKRKVADAPSEADSGPTAAISCPHGQLMPEQATGAKRVLVPEGFWLFLYEDATSVKNDDLLVCPTFPLDSKECSQCSSELSEVVCMEDSMRLLKQRQRQSHEKLFSGKNMPLSLDCTYFLVPSSWISKWRNYINPAFKNSDTPETLNVVIGALLCEKHSRLIERPPELIFRRGAIIPRESSAGGLTIISENDWKCFCEEWGATETQGVSAKVEIINDSANAIAGSCEEMAICEDQLANWDKVNNESGNGQVLFKTCPEVCESCIGEKESCELVHKLNYSNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRSRRTKNGNSVNLKVSASTSIYQLKMMIWETFGVVKENQILQKGDITIDNNDENTTLVDVNIFAGDQIIVRDSEIHENRDIADELCYEKKDTQHTEGGFRGTLLTSNVSSQVV* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5433 1092 CDD Peptidase_C19L 108 456 IPR033841 GO:0004843
Mal1g5433 1092 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Mal1g5433 1092 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1062 - -
Mal1g5433 1092 MobiDBLite consensus disorder prediction 407 421 - -
Mal1g5433 1092 ProSiteProfiles DUSP domain profile. 758 878 IPR006615 GO:0004843
Mal1g5433 1092 MobiDBLite consensus disorder prediction 401 436 - -
Mal1g5433 1092 CDD Ubl_USP48 982 1085 IPR044743 GO:0004197|GO:0004843|GO:0016579
Mal1g5433 1092 ProSiteProfiles DUSP domain profile. 523 615 IPR006615 GO:0004843
Mal1g5433 1092 Gene3D - 514 614 IPR035927 -
Mal1g5433 1092 SUPERFAMILY Cysteine proteinases 104 459 IPR038765 -
Mal1g5433 1092 MobiDBLite consensus disorder prediction 1 23 - -
Mal1g5433 1092 MobiDBLite consensus disorder prediction 422 436 - -
Mal1g5433 1092 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 459 IPR028889 -
Mal1g5433 1092 Pfam Ubiquitin carboxyl-terminal hydrolase 108 456 IPR001394 GO:0004843|GO:0016579
Mal1g5433 1092 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Mal1g5433 1092 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1062 - -
Mal1g5433 1092 SUPERFAMILY Ubiquitin-like 984 1049 IPR029071 -
Mal1g5433 1092 ProSiteProfiles DUSP domain profile. 630 732 IPR006615 GO:0004843
Mal1g5433 1092 SUPERFAMILY DUSP-like 526 614 IPR035927 -
Mal1g5433 1092 Gene3D Cysteine proteinases 93 459 - -
Mal1g5433 1092 SMART dusp 541 617 IPR006615 GO:0004843
Mal1g5433 1092 Gene3D - 981 1052 - -
Mal1g5433 1092 Gene3D - 753 878 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5433 Mal-Chr1 128752316 128761020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5433 86 387 Miscellaneous Gene Families AT4G31670 28.750 2.07e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5433 - - gmx:100795556 1739.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5433 1 128752316 128761020 Mal1g5433 1 128752316 128761020 ECH
Mal1g5433 1 128752316 128761020 Mal2g0788 2 9076722 9087262 PCT