Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3118 ATGTTCAAGAAAATGATGAAAGGAGGGCATAAAAAGCCCTCCAAATCGGATTCCACCGATCCACCACCGTCGGGAAACAACCGCAATTCATCAGCTCCGGTTATCGTCAACCACGCCTCACGCGGCGGTGGTGCTTCCGGAACTTCCGCTGCTTATTCCTCCGGTGTTGCGATGCCAATGACTCCACCTTCCGGCACAATGGAACCGGTTCCGTTGTTCCGCGACGTGCCCGTCTCCGATAGGCAGAATCTCTTCCTCAGGAAGCTTCATGTATGTTGCTTCTCGCTGGATTTCACTGATACACTGAAGAACGTTCGTGAGAAAGAGATCAAGCGTCAAGCTTTGATGGAGCTTGTTGAGTTTATTCAATCGGGTTCGGGGAAAATTTCAGAGAATTGTCAAGAGGAGATGATCAGGATGATATCTATCAACATTTTCCGGTGCTTACCGCCTGCGTCGCACGAGAACACCGGGACAGAGTCGACTGATCCTGAAGAGGAGGAGCCTTGTTTGGAGCCAGCATGGCCACACTTGCAGCTTGTTTATGAGCTTCTGCTAAGATATGTGGTTTCTTCAGATACTGATACAAAGGTTGCAAAACGGTACATTGATCATTCCTTTGTGTTAAAGTTGCTTGATTTATTTGATTCTGAGGATCCTCGCGAGCGCGAGTATTTGAAAACTATTCTGCATCGTATATATGGAAAATTCATGGTTCATAGGCCGTTTATTAGAAAAGCAATTAACAATATTTTTTATCGGTTTATATATGAGACTGAGAGACACTGTGGTATTGGGGAGCTTTTGGAGATTCTTGGTAGTATTATTAATGGGTTTGCTTTGCCTATGAAAGAGGAGCATAAGTTGTTTCTTGTTAGGGCTCTTTTGCCTCTGCATAAACCGAAATCGGTTGTTATGTACCACCAACAGTTGTCATACTGCATAACTCAGTTTGTGGAGAAGGATTTTAAGCTGGCGGATACGGTTATTCGGGGCTTGTTGAAGTATTGGCCTGTTACTAATTGTCAGAAGGAAATTCTCTTTCTTGGAGAACTTGAAGAAGTGTTGGAGGCTACACAGGGTGCTGAATTTCAACGCTGCATGGTTCAACTTTTCAAACAGATTTCCCGCTGCCTCAACAGTTCGTTTCAGGTTGCAGAGCGAGCCCTCTTTTTATGGAATAATGAGCATATTGTGAGCTTAATTGCTCAAAACAGGACTGTGATATTACCGATAATATTTGAAGCGTTTGAGAGAAATATCGAGGGTCACTGGAACCAGGCAGTTCATGGTCTGACTGTGAATGTTCGCAAAATGTTTATTGAAATGGATGCTGAATTATTTGAAGAGTGCCAGAGGAATTATGCAGAGAAGCAGGCAAAAGCCAAAGAAGAGGCAGAGAAGCGGGAATTAAACTGGAAGAGGCTGGCAGAAGCAGCTGCACAGAACGGGGTTGCAGATATGGTCACAGATTAG 1476 0.4444 MFKKMMKGGHKKPSKSDSTDPPPSGNNRNSSAPVIVNHASRGGGASGTSAAYSSGVAMPMTPPSGTMEPVPLFRDVPVSDRQNLFLRKLHVCCFSLDFTDTLKNVREKEIKRQALMELVEFIQSGSGKISENCQEEMIRMISINIFRCLPPASHENTGTESTDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHCGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVVMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEILFLGELEEVLEATQGAEFQRCMVQLFKQISRCLNSSFQVAERALFLWNNEHIVSLIAQNRTVILPIIFEAFERNIEGHWNQAVHGLTVNVRKMFIEMDAELFEECQRNYAEKQAKAKEEAEKRELNWKRLAEAAAQNGVADMVTD* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3118 491 MobiDBLite consensus disorder prediction 1 56 - -
Mal1g3118 491 MobiDBLite consensus disorder prediction 18 55 - -
Mal1g3118 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mal1g3118 491 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 71 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mal1g3118 491 Coils Coil 448 468 - -
Mal1g3118 491 SUPERFAMILY ARM repeat 82 463 IPR016024 -
Mal1g3118 491 PIRSF PP2A_B56 4 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mal1g3118 491 Gene3D - 77 479 IPR011989 -
Mal1g3118 491 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3118 Mal-Chr1 47345042 47349849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3118 K11584 - gmx:100795277 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3118 1 47345042 47349849 Mal1g3118 1 47345042 47349849 ECH
Mal3g4250 3 121788891 121794226 Mal1g3118 1 47345042 47349849 PCT