Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3274 ATGAGAAACACTAGGTTGAACATCATCTCTCAGCCCAACCAGGAAGCTGATGCTGATGCTATTTCTAACACAAAACCTTTGGAGTTGCAGTTTCTTACGTCTTCCATACAGAACATCAAAGCTTTGATAAACAATCCTGGGAACGTTTCAGGAAATGGGAATGGATCATTTTATCTTCATATCCAAAACGTCAACGTGCATCACCCTGGGCATACGGCACCATCACGTCCACTGAGGCCTCCTTCTGCATATGGTCACAAAAGAGCTGTGTTATTCGGAATCAATTACGGTAACACGGCGGCACCGAGGCTTAAAGGTTCTGTGAATAATGCTCAGTGCATGAAAGACTTTTTGATTAACAAGTTGGGTTTCCCTGGTGATTCCATTTGGATGTTCACAGATGATTCAGAGGAGAAAACTGCAATCCCAACAAAACACAACATGCGAGTTGCCATGAAGTGGTTGGTTGAGGATTGCCAAGCAGGGGACTCCTTGGTGTTTTACTTCTCTGGGCAAGTAGCAAGGGTAAAAGATCATAACGGGGATGAACTTGATGGGTGTGATGAAGCAATCTGCCCTGTAGATTATGAAGACGAGGGGAAGATTCGCGATGATGAAATCAATACCGCAATTGTTAGGCCTCTACCTCATGGTGCCAAACTTCATGCCCTTGTTGATGCATCCTTTAGTGGGACAATTCTTGACTTGCAATTTGTGTACACAAAGATGAACTGGATTGGTTATTGGGGATGGAAAGATCATAGACCACGTCGAGGTGATTTCAAAGGCTCAAAAGGAGGTCTAGCAGTTTGCATTTCAGCCTGTGGTGACAATGCAATTTCAGCAGACAAGTCGGCATTGACTCAGACTTTCATCCAAGCAATGCAAGATGCACCTAAATTGACTTATGGGAGCTTGTTGGATGCCATGCGTTCTACAATCTATTCGGCTAAAGCAGGAAAATTTGTCAGGGACATTTTGCAGCAGTATGCTCATGTACTCCCTCCGGTCCTATTTATAAGCAACAAAAAAAAAATTCACATAGTTTAA 1050 0.4333 MRNTRLNIISQPNQEADADAISNTKPLELQFLTSSIQNIKALINNPGNVSGNGNGSFYLHIQNVNVHHPGHTAPSRPLRPPSAYGHKRAVLFGINYGNTAAPRLKGSVNNAQCMKDFLINKLGFPGDSIWMFTDDSEEKTAIPTKHNMRVAMKWLVEDCQAGDSLVFYFSGQVARVKDHNGDELDGCDEAICPVDYEDEGKIRDDEINTAIVRPLPHGAKLHALVDASFSGTILDLQFVYTKMNWIGYWGWKDHRPRRGDFKGSKGGLAVCISACGDNAISADKSALTQTFIQAMQDAPKLTYGSLLDAMRSTIYSAKAGKFVRDILQQYAHVLPPVLFISNKKKIHIV* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3274 349 Pfam Caspase domain 87 315 - -
Lja6g3274 349 Gene3D - 30 323 - -
Lja6g3274 349 PANTHER METACASPASE-4 27 324 - -
Lja6g3274 349 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 27 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3274 Lja-Chr6 61075094 61077258 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3274 K22684 - gmx:100779288 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4039 4 73536806 73539556 Lja6g3274 6 61075094 61077258 PCT