Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3273 ATGAGAAACACTAGGATGAATATCATCCCTCAGCCCAATCAGGATGGTGATGGTGATGCTATTTCTAACATAAAACATGTGGAATTGAAGTCTATTATGTCTTCCATAGAGAACATTAAAGCTTTGATCAACAATCCTGGGAGCGTTTCAGGGAATGGGAATGGGTCATTTTATCTTAACATCCAAAACGTAAACGTGCATCATCCTGGGTATGGGAATGGGAGTCTTGCCCAATTCCAATCTCCAATGGGGCCACCATCTCCACTGAAGCCTCCTTCTGCATATGGTCACAAGAGGGCTGTGTTATTCGGAATCCATTATGGTAACACGGCAGCGCCGAGGCTTAAAGGTTCTGTGAATAATGCTCAGTGCATGAAAGACTTTTTGATTAACAAGTTGAGTTTCCCTAGTAATTCCATTTGGATGTTCACAGATGATTCAGCGGAGAAAAATGCAATCCCAACAAAACACAACATGCGAGTGGCAATGAAGTGGTTGGTTGAGGATTGCCAACCAGGGGACTCCTTGGTGTTTTACTTCTCTGGACACGGAGCAAGGGTGAAAGACCATAATAGGGATGAACTTGATGGGTGTGATGAAGCAATCTGCCCTGTCGATTATGAAGATGAGGGGAAGATTCGCGATGATGAAATCAACGCTGCAATTGTTAGGCATCTGCCTCATGGTGCCAAACTTCATGCTCTTGTTGATGCATCCTTTAGTGGGACAATTCTTGACTTGCCATTTGTGTACACCAAGATGAACTGGATTGGTTCTTCTGGATGGAAAGATCATAGACACCGCAGAGGTGGCATCAAAGGCTCAAAAGGAGGGCTAGCGGTGTGTATTTCAGCCTGTGGTGACAATGGAATTTCAGCAGATAAGTCGGAGCCACAACTGTCGTCTTCAGAAAAGTTTAATATGAATTCCAAGTTGATTCTAATGTGA 948 0.4378 MRNTRMNIIPQPNQDGDGDAISNIKHVELKSIMSSIENIKALINNPGSVSGNGNGSFYLNIQNVNVHHPGYGNGSLAQFQSPMGPPSPLKPPSAYGHKRAVLFGIHYGNTAAPRLKGSVNNAQCMKDFLINKLSFPSNSIWMFTDDSAEKNAIPTKHNMRVAMKWLVEDCQPGDSLVFYFSGHGARVKDHNRDELDGCDEAICPVDYEDEGKIRDDEINAAIVRHLPHGAKLHALVDASFSGTILDLPFVYTKMNWIGSSGWKDHRHRRGGIKGSKGGLAVCISACGDNGISADKSEPQLSSSEKFNMNSKLILM* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3273 315 PANTHER METACASPASE-4 24 295 - -
Lja6g3273 315 Gene3D - 62 315 - -
Lja6g3273 315 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 24 295 - -
Lja6g3273 315 Pfam Caspase domain 98 296 - -
Lja6g3273 315 SUPERFAMILY Caspase-like 95 212 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3273 Lja-Chr6 61070546 61072460 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3273 K22684 - gmx:100779288 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4038 4 73529256 73534833 Lja6g3273 6 61070546 61072460 PCT