Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4038 ATGGAAGCTGCATCTAAATATAGAAGGTACAGAAAAGGTGTTTCATCTCCCACTAGCACTACTGTTCATGGTTGCAAAGCAGAGTGTCTAGATCTATTGCCATCAAGAACAGATCAATACTGTTGTTTTTTTTGCCACAATAATGCTAGTTACTCAACTTTGGAGCATGAGAAATCAAGGGAAAATTGTGGACTAGGGTGTCCAGTGAAGAAAATTGGATCCAAATTGTTCAAACTTGGTCATCCTAACAGTTCCAACAAGAGTGGAAATTTGCTAGGAAGGCCATCATCAACTTCTGTGGCATTTTCCTCTGTCTTGCCAACAAGATATGATAAGCGTGCGGTTCTCTGTGGAGTTTCTTACACAAAAAGGAAGTTCAGGCTCAAGGGAACCATTAATGACATAAGGAACATGAAGGAGCTGTTGGTTAAGAACTTTAAGTTTCCAAATGAGTGCATAAGAGTCCTCACAGAACAAGAACATGATGCCAATTTGATACCAACAAAACACAACATATTGGAGTCCTTAAGGTGGCTTGTGAAGGAGTGTAAGCCAGGAGACTCATTGGTGTTTTACTTCTCAGGGCACGGTTTGCAGCAACCAGATTTCAAAGAAGATGAGATTGATGGGCTTGATGAGACTCTTTGTCCTGTTGATTTCATGAAAGAAGGAATGATCACTGACAATGAAATAAACTCTACCATTGTTTGGCCACTCAAGAAAGGTGTCATACTTCATGCTATTGTTGATGCTTGTCACAGTGGAACTATTCTTGACCTTTTGCATGTTTATAATTATGGAAGAGGAATTTGGGAGGATAACAAGCCCCCTTCTAAAGAACCTATTAGAAAACATACAAGTGGTGGATTGGCCATTTGTTTGAGTGCTTGTGAAGATAGCCAGACAGCTGCTGATAGCACAGTTTTTGGTGGAAAGGGAATGAATGGTGTTCTGACTTATCTTTTCACAAAAACAATCAGAGAATGCCCTGAAATAACTTATGGGCGTCTACTAGAAAAGATTCATGATGAAATGAAAAAGATTAACCAGAGAAGATGCCATAACCGCATCTTGCAACATATCTTCCATTGTAAAATTGCACAGGATCCTCTTTTATCATCATCTGAGAAATTTGATGTGTCTGCGACAATATTCAAATTGTGA 1164 0.3918 MEAASKYRRYRKGVSSPTSTTVHGCKAECLDLLPSRTDQYCCFFCHNNASYSTLEHEKSRENCGLGCPVKKIGSKLFKLGHPNSSNKSGNLLGRPSSTSVAFSSVLPTRYDKRAVLCGVSYTKRKFRLKGTINDIRNMKELLVKNFKFPNECIRVLTEQEHDANLIPTKHNILESLRWLVKECKPGDSLVFYFSGHGLQQPDFKEDEIDGLDETLCPVDFMKEGMITDNEINSTIVWPLKKGVILHAIVDACHSGTILDLLHVYNYGRGIWEDNKPPSKEPIRKHTSGGLAICLSACEDSQTAADSTVFGGKGMNGVLTYLFTKTIRECPEITYGRLLEKIHDEMKKINQRRCHNRILQHIFHCKIAQDPLLSSSEKFDVSATIFKL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4038 387 Pfam Caspase domain 112 375 - -
Lja4g4038 387 PANTHER METACASPASE-4 53 387 - -
Lja4g4038 387 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 53 387 - -
Lja4g4038 387 SUPERFAMILY Caspase-like 115 349 IPR029030 -
Lja4g4038 387 MobiDBLite consensus disorder prediction 1 20 - -
Lja4g4038 387 Gene3D - 76 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4038 Lja-Chr4 73529256 73534833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4038 K22684 - gmx:100796640 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4038 4 73529256 73534833 Lja4g4038 4 73529256 73534833 ECH
Lja4g4038 4 73529256 73534833 Lja6g3273 6 61070546 61072460 PCT