Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g3244 ATGGCGGAGCATGCGACGGAGAAGGTGAAGGCGGAGGCAGTGCAGAAAATCGAATCGTTTGAAGTTCTGCCAAAGCTTGTCGTCTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCGAAGCGTGAAACGCCTTCTCTGTATCCCCACGCAAAGGGCATATTAATGGCGCTGAAGCAGAAAGGAATCGATGTTGCCATTGCTTCTCGATCACCAACCTCTGATATTGCTAATGCTTTTCTCAACAAATTGAACCTCAATTCAATGTTTGTTGCCAAGGAAATATTTTCAAGCTGGACGCATAAAACTGATCATTTTCACAGAATTCATTCAACCACTGGGGTTCCTTTCAGCTCTATGCTCTTCTTTGATGATGAGAATAGGAACATCCAAGCGGTCTCTAAAATGGGAGTGACAAGCATTTTGGTTGGAAATGGTGTAAATCTTGGATCACTAACTGAAGGCCTTGCACAATTTGCTAGAAACTGGAATGCATCGCAGAAGAACAAGCAGAAATGGCTCACTGACTACTCTAACAAGCCAAATACCTCAAACCATGCTCCCTGA 579 0.4421 MAEHATEKVKAEAVQKIESFEVLPKLVVFDLDYTLWPFYCECRSKRETPSLYPHAKGILMALKQKGIDVAIASRSPTSDIANAFLNKLNLNSMFVAKEIFSSWTHKTDHFHRIHSTTGVPFSSMLFFDDENRNIQAVSKMGVTSILVGNGVNLGSLTEGLAQFARNWNASQKNKQKWLTDYSNKPNTSNHAP* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g3244 192 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 7 180 IPR010036 GO:0016791
Lja6g3244 192 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1-LIKE 7 180 - -
Lja6g3244 192 SFLD Haloacid Dehalogenase 6 172 - -
Lja6g3244 192 SUPERFAMILY HAD-like 24 155 IPR036412 -
Lja6g3244 192 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 25 140 IPR010033 -
Lja6g3244 192 SFLD C1.5.2: MDP Like 6 172 - -
Lja6g3244 192 CDD HAD_MDP-1_like 24 147 IPR035679 -
Lja6g3244 192 Pfam Acid Phosphatase 23 43 IPR010036 GO:0016791
Lja6g3244 192 Pfam Acid Phosphatase 49 165 IPR010036 GO:0016791
Lja6g3244 192 Gene3D - 3 170 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g3244 Lja-Chr6 60813387 60814997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g3244 K17619 - gmx:100305763 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g3244 6 60813387 60814997 Lja6g3244 6 60813387 60814997 ECH
Lja4g4006 4 73132350 73133831 Lja6g3244 6 60813387 60814997 PCT