Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2791 ATGGGTACGGAGATTCTACGGCCGCAGAATTGCTTAATCGAACGGATCAGAGCACCGCCGGCGAGTTTTTCCCGGCGGAGAACAACCTATGGAAACTGCGGTGCTTACCTTAACGCTCCCTTCAGGGCTAACCGGAAACCGGTGGCCCGGCCGGAGCAAAGGAAGCGGGTGGTGGAGAGACGTCCGAGCTCCGATGATTCTAAGGTGGCGAGAGGCAGCGGGTTGGTGATGGAGAAGGTGACGATTCTCCGGCGAGGAGAATCGCTCGATTCGCAGATCAAGAGCGAGGCGTTGAAGAGAGAAGGTGACGAGCTCGTGGTTGTTGGGACTCAGCGGCTTGGACCCGACCCGGAAATGGTTCCTAAGCAGATCCGGATCATGGATGGCCAGATCGGGTTTGACATGTACGCTGGATCGGCGTTTGCGATGTCGCCGTCGCCGAGGGCGCTTCCTTTGCCGTCTTTTTGGAAGAAGGTTGCGCCGGCGGTGGCTGTTGACGACTCCGCCACGCGGGATCTGAGGCGCTTGCTCCGGTTGGAATGA 543 0.5912 MGTEILRPQNCLIERIRAPPASFSRRRTTYGNCGAYLNAPFRANRKPVARPEQRKRVVERRPSSDDSKVARGSGLVMEKVTILRRGESLDSQIKSEALKREGDELVVVGTQRLGPDPEMVPKQIRIMDGQIGFDMYAGSAFAMSPSPRALPLPSFWKKVAPAVAVDDSATRDLRRLLRLE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2791 180 PANTHER OS01G0384800 PROTEIN 1 180 - -
Lja6g2791 180 MobiDBLite consensus disorder prediction 45 71 - -
Lja6g2791 180 Pfam Proline-rich nuclear receptor coactivator motif 136 155 - -
Lja6g2791 180 MobiDBLite consensus disorder prediction 47 67 - -
Lja6g2791 180 PANTHER SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2791 Lja-Chr6 56999777 57000319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2791 - - aprc:113845975 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2791 6 56999777 57000319 Lja6g2791 6 56999777 57000319 ECH
Lja6g2791 6 56999777 57000319 Lja3g1771 3 19898962 19911468 PCT