Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2779 ATGGGTATGCATTTGAATAGAGAGGTTACTGTTAAGGTTATGCTTCAAGTTTTTATAGTTTTGGCCTTGTCTAGGATTTCAACTTCAGATGAACCACCTGCAAATTTTGTCTTTGGAGATTCGCTTGTTGATGTGGGGAACAACAATTACATTGCTTCCCTCTCAAAGGCTAACTTCATGCCCTTTGGCATTGACTTTGGAAGTCCAACAGGAAGGTTCACAAATGGAAGAACCATTATTGACATCATAGGTCAGGAACTGGATTTTGGTTTGACACCACCTTATTTGGCACCCACTACAGTTGGATCAGTGGTTCTGAAGGGTGTTAACTATGCCTCTGGTGCAGGTGGAATTCTCAATGCCACTGGAAAAGTACTAGGTGATCGAATCAACTTCGACGCGCAGATAGATAACTTTGCAAATAACAGGCAGGACATAATCTCCAGCATTGGTATTCCTGAGGCTCTCAATCTATTCAACAGGGCAATTTTTTCAGTAACAATAGGTTCAAACGACTTCATCAACAACTATTTAACACCAACAGTCTCAATGGATGATCAGAAATTTGCATCACCAGAACTCTTTGTGGTCACCTTAATGTCAAAGCTCAGAGAACAGCTCACTAGGCTATTCAATTTGGGTGCCAGAAAAATTGTGGTGACAAATGTAGGGCCGATTGGGTGCATACCAAGTCAAAGGGATACAAACCCATCTGCTGGAGATTACTGTGTTAGTTTACCCAATCAGCTAGCACAGTTATATAACAACCAGTTGAAATCCCTCATTGCAGAGCTCAGCTCAAATCTGAAGGGTTCAATGTTTGTTTATGCTGATGTGTACCACATTTTAGAAGACATGCTCAACAATTACATAGTATATGGTTTTGAGAACCCATCTTCTTCTTGCTGTTACATGGCTGGGCGATTTGGAGGTTTGATTCCTTGTGGTCCAACATCGACGGTTTGCTGGGACAGGTCCAAGTATGTGTTTTGGGACCCTTACCATCCCACTGATGCAGCAAATGTTATCATCGCTAAGCGCTTGTTAGATGGTGATCAGAATGACATTTTCCCAATGAATATTCGCCAACTCTTTCAATCTTGA 1104 0.4158 MGMHLNREVTVKVMLQVFIVLALSRISTSDEPPANFVFGDSLVDVGNNNYIASLSKANFMPFGIDFGSPTGRFTNGRTIIDIIGQELDFGLTPPYLAPTTVGSVVLKGVNYASGAGGILNATGKVLGDRINFDAQIDNFANNRQDIISSIGIPEALNLFNRAIFSVTIGSNDFINNYLTPTVSMDDQKFASPELFVVTLMSKLREQLTRLFNLGARKIVVTNVGPIGCIPSQRDTNPSAGDYCVSLPNQLAQLYNNQLKSLIAELSSNLKGSMFVYADVYHILEDMLNNYIVYGFENPSSSCCYMAGRFGGLIPCGPTSTVCWDRSKYVFWDPYHPTDAANVIIAKRLLDGDQNDIFPMNIRQLFQS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2779 367 CDD SGNH_plant_lipase_like 33 352 IPR035669 -
Lja6g2779 367 Gene3D SGNH hydrolase 24 352 IPR036514 -
Lja6g2779 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 20 366 - -
Lja6g2779 367 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Lja6g2779 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 20 366 - -
Lja6g2779 367 SUPERFAMILY SGNH hydrolase 156 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2779 Lja-Chr6 56898651 56900623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2779 33 367 Acyl Lipid Metabolism Gene Families AT4G10950 35.207 4.65e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2779 - - gmx:100813870 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2779 6 56898651 56900623 Lja6g2779 6 56898651 56900623 ECH
Lja4g1366 4 12234623 12236453 Lja6g2779 6 56898651 56900623 PCT