Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1366 ATGGGGATAGATTTGAATAGGGTCACCATTGTTGAGATTGTACTTAGAGTTTTCATATTCTTAGTCTTCTTTAGGATATCAACTTCAGATGATCTACCTGCAAATTTTGTATTCGGAGATTCTCTAGTTGATGTTGGAAACAATAACTACATTGTTTCGTTCTCAAAGGCTGATTTTTTACCCAATGGCATTGATTTTGGAAGACCAACCGGGAGGTTTACTAATGGAAGAACCATTGTCGACATCATGGGTCAAGAATTGGGTTGTGGCCTCACCCCACCTTATTTGGAACCCACTACAGTTGGACCAGTGGTTCTGAAAGGTGTCAATTATGCCTCTGGTGGGGGTGGAATTCTCAATTTCACCGGAAAAGTCTTTGTGGGAAGACTCAACTTAGATGCACAGATTGACAATTTTGCAAATACCAGACAGGACATAATCTCTAACATTGGACCTCCTTTGGCTCTCAATCTATTCAAAAAGGCATTGTTTTCTGTAACAATAGGCTCAAATGATTTCATTAATAACTACTTAACACCTGGAGTCACATTTTCTGAGCATGGTTTTTCATCTCCAGAACTCTTTGTGGCCTCCATGATAGCAAGACTCAGATTACAGCTCACAAGGCTATTCAATCTGGGAGCCAGAAAAATTGTTGTGGCCAATGTGGGGCCTATTGGGTGCATACCAAATCAGAGGGATACAAATCCAACTGCAGGAGATAGCTGTGTCACTTTCCCTAATCAGTTAGCACAGTTATTTAACATCCAGTTGAAGGGTCTAATTGCAGAGCTCAGTTCAAATCTGGCAGGTTCATTGTTTGTATATGCAGATGTCAACCACATATTAGAAGATATACTCCAGAATTATGCAGCATTTGGTTTTGATAATCCATCTTCAGCTTGCTGTTACATGGCTGGGCGGTTTGGGGGTCTGATCCCGTGTGGTCCAACATCAAAGGTTTGTTGGGACCGATCAAAGTATGTGTTCTGGGACCCTTACCATCCTACTGATGCTGCAAATGTTATCATCGCTAAGCGCCTCTTGGATGGTGGCTCTAGTGATATTTGGCCAATGAATATTCGCCAACTTTATCAATTATAA 1104 0.4121 MGIDLNRVTIVEIVLRVFIFLVFFRISTSDDLPANFVFGDSLVDVGNNNYIVSFSKADFLPNGIDFGRPTGRFTNGRTIVDIMGQELGCGLTPPYLEPTTVGPVVLKGVNYASGGGGILNFTGKVFVGRLNLDAQIDNFANTRQDIISNIGPPLALNLFKKALFSVTIGSNDFINNYLTPGVTFSEHGFSSPELFVASMIARLRLQLTRLFNLGARKIVVANVGPIGCIPNQRDTNPTAGDSCVTFPNQLAQLFNIQLKGLIAELSSNLAGSLFVYADVNHILEDILQNYAAFGFDNPSSACCYMAGRFGGLIPCGPTSKVCWDRSKYVFWDPYHPTDAANVIIAKRLLDGGSSDIWPMNIRQLYQL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1366 367 Gene3D SGNH hydrolase 24 352 IPR036514 -
Lja4g1366 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 20 366 - -
Lja4g1366 367 SUPERFAMILY SGNH hydrolase 109 350 - -
Lja4g1366 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 20 366 - -
Lja4g1366 367 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Lja4g1366 367 CDD SGNH_plant_lipase_like 33 351 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1366 Lja-Chr4 12234623 12236453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1366 32 364 Acyl Lipid Metabolism Gene Families AT4G10950 34.524 2.68e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1366 - - gmx:100791871 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1366 4 12234623 12236453 Lja4g1366 4 12234623 12236453 ECH
Lja4g1366 4 12234623 12236453 Lja6g2779 6 56898651 56900623 PCT