Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2755 ATGGTGTTGGCTTCCCCAGATTCAATTCTGGACGAAAGAATTAAACTCATCGACCTTCCCAGGGTGGACCTTACGGCCGAGAGGTCCACCGCGGCGAAACTCATCGTGAAAGCGTGCGAAGAATACGGTTTCTTCAACGTGGTTAACCATGGCATCCCTCATGACATCATAACCAAGATGGAAGAAGCAGGTTTCGATTTCTTCGCGAAACCGCTGCAAGAAAAGAAAGAGGCAGCGTTTGGCGATTACCCCTTTGGTTATGGCAGCAAGAACATTGGTTTCAATGGAGACAAAGGTGAAGTGGAGTATCTTCTTCTCAAAGCCAGTAGTGCTACCGATTCTGTTGCTCCGCTGTCAAAAAACGTGTACAATGATCCATCAAACTTCAGCTCTACTGTGAGTGCATACACAGATGCTTTGAGAGAGCTAGCATGTGAGATATTGGAGCTAATGGCAGAGGGTCTGGGGGTCCCTGATACACTGGTTTTCAGCAGGTTGATCAGGGACGTTGATAGTGACTCAGTCCTCAGGTTCAATCACTACCCTCCTTTACTTAACAAAGACCCCTGTACTAAGGTTGGGTTTGGGGAGCATTCTGACCCTCAGATACTGACCATCCTCAGATCCAACGATGTGGGTGGCCTCCAAATCTCTGTTCAAGATGGCGTGTGGAACCCAGTCACTCCTGATCCCTATGCTTTCTGTGTTAACGTGGGAGATCTACTACAGGTGATGACAAATGGAAGATTTATGAGCGTGAGACACAGGGCCGTGACCAACTCATGCAAGTCTAGAATGTCAGTGGCATATTTTGGGGCTCCACCACTTGATTCCTTCATTGTTGCTCCTCCAGTTATGGTTACACCCGAGAGGCCCTCCCTCTTCAAAGTATTTACTTGGGCTGAATACAAGAAAGTCACCTACTCTCTCAGGCTTGGAGACAGCCGCATTGACCTTTTCAGGAAGTGCACACAAGTAGAGTAA 984 0.4787 MVLASPDSILDERIKLIDLPRVDLTAERSTAAKLIVKACEEYGFFNVVNHGIPHDIITKMEEAGFDFFAKPLQEKKEAAFGDYPFGYGSKNIGFNGDKGEVEYLLLKASSATDSVAPLSKNVYNDPSNFSSTVSAYTDALRELACEILELMAEGLGVPDTLVFSRLIRDVDSDSVLRFNHYPPLLNKDPCTKVGFGEHSDPQILTILRSNDVGGLQISVQDGVWNPVTPDPYAFCVNVGDLLQVMTNGRFMSVRHRAVTNSCKSRMSVAYFGAPPLDSFIVAPPVMVTPERPSLFKVFTWAEYKKVTYSLRLGDSRIDLFRKCTQVE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2755 327 PRINTS Isopenicillin N synthase signature 35 52 - -
Lja6g2755 327 PRINTS Isopenicillin N synthase signature 198 219 - -
Lja6g2755 327 PRINTS Isopenicillin N synthase signature 234 260 - -
Lja6g2755 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 322 - -
Lja6g2755 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 15 90 IPR026992 -
Lja6g2755 327 Pfam 2OG-Fe(II) oxygenase superfamily 173 272 IPR044861 -
Lja6g2755 327 Gene3D - 4 310 IPR027443 -
Lja6g2755 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 171 274 IPR005123 -
Lja6g2755 327 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 322 - -
Lja6g2755 327 SUPERFAMILY Clavaminate synthase-like 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2755 Lja-Chr6 56648332 56656450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g2755 8 321 Glycosyltransferase AT5G59530 30.488 5.97e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2755 K04125 - gmx:100811043 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2755 6 56648332 56656450 Lja6g2755 6 56648332 56656450 ECH
Lja4g1395 4 12476276 12481891 Lja6g2755 6 56648332 56656450 PCT