Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2303 ATGGTTGGGCCGGAGAAATCTCAGCGTGTCAAGGTCTACCGACTGAATGATGATGGGAAATGGGATGATCAGGGTACTGGGCTTGCCACTGTTGAATTTTTGGAGCGATCAGAAGAACTGGGTTTATATGTTTATGACGAAGATGACAATGATATCATACTTTTAAATCGCATCAGTTCTGAAGATATTTACAGGAAACAAGAAGATACAATAATTTCATGGAGAGATCCAGAATTTGCCACAGAATTGGCGCTTAGCTTTCAAGAACCCGATGGATGTGCTTACATATGGGATCAGATTTGCAATGTGCAAAGGAATATGCAATTTAATACATTAAACAGCGATGCATTTCACAGTGTAAACAGTGAGTTGCGGGAGTTGCCGGCAGTTGTGTTGTCAACCCTTCCTTTGATTCTTAAGATTGTGGTTGAAAATGGCATTGCTGAACAATTGCGGCTTACAGAATTAGTATTAAGTGATCAAGATTTTTTCCGGAAGCTTATTGAAGTTTTCAGAGTTTGTGAAGACTTGGAAGATATGGATAGCCTTCACATGATTTTCAAAATAATCAAAGGAATCATTTTGCTTAATAGTACACAAATTTTTGAGCGAATATTCAGTGATGAATTTATAATGGACATTATTGGCGCCTTGGAGTATGATCCAGAGGTGCCTCATGTTCAACATCATCGTAAATTCTTACAGGAGCATGCCATTTTTAAGGAGGCCATACCTATAAAAAATTCAGTTGTGCTATCGAAGATACATCAAACGTATAGAATTGGTTTTTTGAAGGATGTTGTTTTGGCTAGAGTATTGGATGAGGCAACTGCTGCAAATCTTAACTCTATAATACATGGAAATAATGCCACTGTTGTTTCTTTATTGAAGGATGACAATACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCGCCCACCACCTCTCCTGAATCAAAGAAAAACATGGTTCATTTCTTGTATGAGTTCTGTGGTTTAAGCAAAAGCTTACAGATGGTACAGCAGCATCGGCTTTTTAGGGATTTGATGAATGAGGGTATCTTTGACATTGTCACTGATGTCTTGCAAAGTCAAGACAAGAAGCTTGTGCTTACTGGAACAGATATCCTCATTCTCTTCATGAATCAGGATCCTAATCTTCTGCGGTCCTATGTTGTTCGGCAGGAAGGAATTACACTTCTTGGACTGTTGGTTAGAGGAATGATAACGGATTTTGGAGATGACATGCACTGCCAGTTTCTTGAGATACTTCGCAGTCTATTAGACTCATGTACATTGTCTGGAGCACAGAAAGACTCTATTATTGACATTTTCTATGACAAGCATTTGGGTCAACTGATCGAAGTGGTAACAGCATCATGTCCTTCAGAAAATGTTGCTCATGTAAGCAGCAAAACCATAGATCATGATCAAGGAGTCCAAAATCGGAGTGGCACAAAGCCAGAGATTCTATCGAACATATGTGAATTACTATGCTTTTGTGTCCTCCACCACCCATACCGGATAAAGTGCAACTTCCTTCTGAATAATGTGATTGAAAAGATTTTGTTACTGACACGGAGAAGGGAAAAATATCTCGTTGCTGGTGCTGTTCGGTTTGTTCGTATTATTCTTTCACGTCATGATGACCATCTGATAAATTATTTTGTTAGAAATGATCTTCTCAAACCAGTTGTAGATGTTTTTGTGGCTAATGGCAATCGCTACAATCTGCTAAATTCGGCTGTTCTTGAACTTTTTGAGTATATTCGCAAGGAGAATATGAACCCATTGCTGAAATATATAGTTGATTCTTTTTGGGACAAGCTAGTGCAATTTGAGTATTTGGCTTCCATTCATTCCCTGAAAGTAAAATATGAGCAGTGTTTGGAAAATGATGGGACAAACGGTACTGCTATTATGAATGACTTTCGAAGACGACTTGATGAGCGTGCCTTGGAGAAAGAGGAAGACTACTTTACTGAGGGCAGTGATGATGAGGACACGACCTCTGCATCCATTCCACATAATCAGAAAGGGCAGCAGAAAGAACCTGTATTAACCAATGGAGTTGCTGCAAGCCACACAGATTCAAGTCCAAGGTTTGGTGGACTGGTTGACTATGATGATGATGAGGATGATGAAGACTACAAGCCACCACCACCAAGGAAGCAGCTAGAAGCTTCTGAAGAGGATGAAAGGACAATAGAGTCTCTCAGGCTGAAAAGGAAATCACCTTCAAAGGATAATGAACCTGAGCTTGTACAGAAGCAGAAGTTGTCTAAAAATTCAAAATCAAGTGTTTTTTCTGCCTTGTGTTCGACATTGGGCCAGGCTGTGCTACCAGATAAGGAAACTGCAACAAACATTCATACTGATGGGAGGATGAGCTCAAGTGAAGACAATCGAGAAAATGAGACAAATGTTTCTAGAAGCTGCTCTGAGAATAGCAGCACAACAGCTGACGAGAATCACTTAGATAAAGAAACTGCTGCATATAGAAACTCTTCTGATGGGTTACAGGGCACTACAGATAATGGGCAGTTGGGTGGCGAGGAGCATACATTGGTTTCACCAAAATCCTCACCTGAGATGGCCATAAATGGATCTTAA 2613 0.398 MVGPEKSQRVKVYRLNDDGKWDDQGTGLATVEFLERSEELGLYVYDEDDNDIILLNRISSEDIYRKQEDTIISWRDPEFATELALSFQEPDGCAYIWDQICNVQRNMQFNTLNSDAFHSVNSELRELPAVVLSTLPLILKIVVENGIAEQLRLTELVLSDQDFFRKLIEVFRVCEDLEDMDSLHMIFKIIKGIILLNSTQIFERIFSDEFIMDIIGALEYDPEVPHVQHHRKFLQEHAIFKEAIPIKNSVVLSKIHQTYRIGFLKDVVLARVLDEATAANLNSIIHGNNATVVSLLKDDNTFIQELFARLKSPTTSPESKKNMVHFLYEFCGLSKSLQMVQQHRLFRDLMNEGIFDIVTDVLQSQDKKLVLTGTDILILFMNQDPNLLRSYVVRQEGITLLGLLVRGMITDFGDDMHCQFLEILRSLLDSCTLSGAQKDSIIDIFYDKHLGQLIEVVTASCPSENVAHVSSKTIDHDQGVQNRSGTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVIEKILLLTRRREKYLVAGAVRFVRIILSRHDDHLINYFVRNDLLKPVVDVFVANGNRYNLLNSAVLELFEYIRKENMNPLLKYIVDSFWDKLVQFEYLASIHSLKVKYEQCLENDGTNGTAIMNDFRRRLDERALEKEEDYFTEGSDDEDTTSASIPHNQKGQQKEPVLTNGVAASHTDSSPRFGGLVDYDDDEDDEDYKPPPPRKQLEASEEDERTIESLRLKRKSPSKDNEPELVQKQKLSKNSKSSVFSALCSTLGQAVLPDKETATNIHTDGRMSSSEDNRENETNVSRSCSENSSTTADENHLDKETAAYRNSSDGLQGTTDNGQLGGEEHTLVSPKSSPEMAINGS* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2303 870 MobiDBLite consensus disorder prediction 666 696 - -
Lja6g2303 870 Gene3D - 267 607 IPR011989 -
Lja6g2303 870 PANTHER BNAC03G34820D PROTEIN 6 99 - -
Lja6g2303 870 MobiDBLite consensus disorder prediction 834 851 - -
Lja6g2303 870 PANTHER ATP SYNTHASE GAMMA-RELATED 98 870 - -
Lja6g2303 870 PANTHER ATP SYNTHASE GAMMA-RELATED 6 99 - -
Lja6g2303 870 MobiDBLite consensus disorder prediction 717 758 - -
Lja6g2303 870 SUPERFAMILY PH domain-like 7 104 - -
Lja6g2303 870 Pfam Phosphatase 4 regulatory subunit 3 161 349 IPR006887 -
Lja6g2303 870 SUPERFAMILY ARM repeat 167 605 IPR016024 -
Lja6g2303 870 Gene3D - 4 123 IPR011993 -
Lja6g2303 870 MobiDBLite consensus disorder prediction 657 870 - -
Lja6g2303 870 PANTHER BNAC03G34820D PROTEIN 98 870 - -
Lja6g2303 870 MobiDBLite consensus disorder prediction 759 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2303 Lja-Chr6 51973222 51989527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2303 K17491 - gmx:100802657 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2303 6 51973222 51989527 Lja6g2303 6 51973222 51989527 ECH
Lja4g1342 4 12048255 12061104 Lja6g2303 6 51973222 51989527 PCT