Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1342 ATGGGTGCGCCGGAGAAATCAGAGGATAACGCTAATTCGATGCAGCGTGTCAAAGTGTACCGTCTGAATCATGATGGAAAATGGGATGACCAGGGTACTGGACATGTCACTGTTGATTATTTGGAGAGATCAGAAGAGCTGGGCTTACTAGTTTATGATGAAGAAGACAATGACACCATACTTAGGCAGCGAATCAGTTCTGATGATATTTATAGGAAACAAGAAGATACCATTATCTCATGGAGAGATCCTGAATATGCTACAGAACTGGCCCTTAGCTTTCAAGAGCCCACCGGATGCTCTTACATATGGGACCACATTTGCAATGTGCAGAGGAACATACATTTCAATAATATAAATAATGAACCATTTCAGAATGTTAACAGTGAGTTAAGGGAGTTGCCTGCTATTGAGCTATCGACACTTCCTTTGATTCTTAAGACTGTGGTTGAAAGTGGCATTGCAGATCAGTTGCGGCTTACTGAGCTAATATTAAGTGATCAAGAATTTTTTCGTAAGCTGATGGAAGTATTTAGTGGATGCGAAAAGTCGCAAAACATGGATGGCCTTCACATGATATTCAAAATAGTCAAAGGGATCATTTTGCTCAACAGTACTCCAATTCTTGAGAGAATTTTTAAAGATGAATTTATAGTGGACATTATCGGTGCCCTCGAGTATGACCCAGAAATTCCTTCTGTTCAACATCATCGTAAATTCTTACATGAGCATGTTGTTTTTAAGGAGGCCATACCTATTAAAGACCCCCTTGTGTTATCAAAGATACATCAGACTTATAGAGTTGGTTATTTGAAGGATGTTGTTTTGGCTAGAGTTTTGGATGAGGCCACGAGTGCAAATCTTAACTCCATAATACATGCTAACAACGCTTGTGTTATTTCATTGTTGAAGGATGACAGCAAATTTATCCAGGAGTTGTTTGCTAGGTTAAAATTGCCCACCACCGCTCAAGAATCGAAGAAGAACTTGGTCTATTTCTTACATGAGTTTTGTAGTGTAAGCAAGAGCTTGCAGATGGTTCAGCAGCTTCGGCTTTTTAGGGATTTAATGAATGAAGGCATCTTTGACATTGTCACTGATGTTCTGCAAAATGATGACAAGAAGTTTGTGCTCACTGGGACAGACATTCTCATTCTTTTCTTGAATCAGGATCCTAATCTTCTGCGGTCATATGTTGTTCGGCAGGAAGGAATTACTCTTCTAGGACTCTTGGTTAAAGGAATGGTAACGGATTTTGGAGAAAACATGCACTGCCAGTTTCTTGAGATTCTTCGCTGTTTATTGGACTCATGCACATTGTCTGGACCACAGAGGGACACTATTATTGACATTTTCTTCGAGAAGCATTTGGGTCAACTGATTGAAGTTATCGCAGCATCATGTCCTTCAGAAAATATTGCTGATGGAAGAACTGGAAGAAGAGTTAAGTGTCAGAATGGAACAAAGCCGGAGATATTATCAAACATATGTGAATTACTATGCTTTTGTGTTCTACATCATCCATACAGGATAAAGTCCAACTTTCTTCTTAATAACGTGATTGAAACAATTTTGTTACTGACACGGAGAGCAGAAAGATACTTAGTTGTTGGTGCTGTCCGTTTTGCTCGAACTCTTCTCTCCCGCCATGATGAGCATTTGTTAAATTATTTTGTTAGGAATAATGTTCTCAAACCGATTGTAGATGCCTTTGTTGCAAATGGCAATCGTTACAATCTGCTCCATTCTGCTGTTTTGGAACTTTTTGAGTATATTCGGAAGGAAAATCTGAAATTATTGCTGAAATATATAGTTGATTCTTTCTGGGATCAGCTGGTGAGATTTGAGTATTTGGCATCGATTCGCTCGCTGAAAGTAAAATATGAGCAGTGTTTGGATAATGGTGGGACAAAAGATGCCGCTACTGTAGTTGACCTTCGGAGACGAACTGATGAGCGTGCTCTGGAGAGAGAAGAGGAACGCTACTTCAATGAGGATAGTGATGAGGAGGATATAGCTTCTGCATCTGTTTCACATGATCAGAATGAACATCAACAACCTACTCTTTCCAATGGAGTTGCTGCAAGCTATTCACAGTCAAGTCCAAAATCACTGGTTGACTATGATGATGATGAGGATGATGAAGATTACCGACCACCACCAAGGAAGCAGCCAGAACCTTCTGAGGAAGATGATGGCATAATGGAGTCTTTAAGGCTGAAAAGGAAATTGCCTTCAAAGGATAGGGAACCCGAACTTGTGAAGAAGCAGAAGTCACCCAAGAACATAAAATCTAAAGAGAGTGTTTTTGCTGCCTTGTGTTCAACATTGAGCCAATCTGTGCTACCTAGTAAGAAAGCTGCAATCAACATTCATCTAGGTGCTCGAACAGTTGAGGGTAGGATGAGCTCAAGTCAAGACAAGCAGGAAGAAGAGGGATCTAGTGTTTCTAGTAGCAGCTCTGATGATAGCAACACAGCGGCTGAAGATAACCATGTTGAGAAACAAACTGCAGCTTCTAAAAGCTTTTCGGACTGTTTGCATGCAACATCAGATAATATACAGTTGGGGGGTGAGGATCGTCCATTGGTTCCCCCAAATTCCTCGCCGGAGATGGCTGTAAATGGATCGTAA 2634 0.4055 MGAPEKSEDNANSMQRVKVYRLNHDGKWDDQGTGHVTVDYLERSEELGLLVYDEEDNDTILRQRISSDDIYRKQEDTIISWRDPEYATELALSFQEPTGCSYIWDHICNVQRNIHFNNINNEPFQNVNSELRELPAIELSTLPLILKTVVESGIADQLRLTELILSDQEFFRKLMEVFSGCEKSQNMDGLHMIFKIVKGIILLNSTPILERIFKDEFIVDIIGALEYDPEIPSVQHHRKFLHEHVVFKEAIPIKDPLVLSKIHQTYRVGYLKDVVLARVLDEATSANLNSIIHANNACVISLLKDDSKFIQELFARLKLPTTAQESKKNLVYFLHEFCSVSKSLQMVQQLRLFRDLMNEGIFDIVTDVLQNDDKKFVLTGTDILILFLNQDPNLLRSYVVRQEGITLLGLLVKGMVTDFGENMHCQFLEILRCLLDSCTLSGPQRDTIIDIFFEKHLGQLIEVIAASCPSENIADGRTGRRVKCQNGTKPEILSNICELLCFCVLHHPYRIKSNFLLNNVIETILLLTRRAERYLVVGAVRFARTLLSRHDEHLLNYFVRNNVLKPIVDAFVANGNRYNLLHSAVLELFEYIRKENLKLLLKYIVDSFWDQLVRFEYLASIRSLKVKYEQCLDNGGTKDAATVVDLRRRTDERALEREEERYFNEDSDEEDIASASVSHDQNEHQQPTLSNGVAASYSQSSPKSLVDYDDDEDDEDYRPPPRKQPEPSEEDDGIMESLRLKRKLPSKDREPELVKKQKSPKNIKSKESVFAALCSTLSQSVLPSKKAAINIHLGARTVEGRMSSSQDKQEEEGSSVSSSSSDDSNTAAEDNHVEKQTAASKSFSDCLHATSDNIQLGGEDRPLVPPNSSPEMAVNGS* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1342 877 MobiDBLite consensus disorder prediction 837 851 - -
Lja4g1342 877 PANTHER BINDING PROTEIN-RELATED 1 825 - -
Lja4g1342 877 MobiDBLite consensus disorder prediction 716 762 - -
Lja4g1342 877 MobiDBLite consensus disorder prediction 795 877 - -
Lja4g1342 877 Gene3D - 285 609 IPR011989 -
Lja4g1342 877 MobiDBLite consensus disorder prediction 657 762 - -
Lja4g1342 877 Gene3D - 10 130 IPR011993 -
Lja4g1342 877 MobiDBLite consensus disorder prediction 809 826 - -
Lja4g1342 877 PANTHER ATP SYNTHASE GAMMA-RELATED 1 825 - -
Lja4g1342 877 SUPERFAMILY PH domain-like 14 111 - -
Lja4g1342 877 MobiDBLite consensus disorder prediction 678 704 - -
Lja4g1342 877 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Lja4g1342 877 SUPERFAMILY ARM repeat 169 611 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1342 Lja-Chr4 12048255 12061104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1342 K17491 - gmx:100786790 1446.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1342 4 12048255 12061104 Lja4g1342 4 12048255 12061104 ECH
Lja4g1342 4 12048255 12061104 Lja6g2303 6 51973222 51989527 PCT